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contig_metadata

17 rows where bioproject = "PRJNA767802" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 17 ✖

bioproject 1

  • PRJNA767802 · 17 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16047753 16047753 PRJNA767802_P_NODE_16013_length_167_cov_0.864407_g15940_i0 PRJNA767802 16013 167 0.864407 1.44355969 Pirellulimonas 2795783 Bacteria Bacteria 101 3.23e-23   NR MEN1680226.1 2026780 g15940 i0 87.3 2.96407185628743 55 7 98.8 0 1 165 521 575 MEN1680226.1 CRISPR-associated helicase Cas3' [Planctomycetota bacterium] diamond 495 102 0.990196078431373 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
23698152 23698152 PRJNA767802_P_NODE_3919_length_437_cov_1.311856_g3846_i0 PRJNA767802 3919 437 1.311856 5.73281072 Pirellulaceae bacterium 2699754 Bacteria Bacteria 276 7.88e-89   NR MBC7856119.1 2699754 g3846 i0 98.6 0.995423340961098 145 2 99.5 0 437 3 162 306 MBC7856119.1 sigma-54-dependent Fis family transcriptional regulator [Pirellulaceae bacterium] diamond 435 276 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
26831762 26831762 PRJNA767802_P_NODE_10241_length_223_cov_1.568966_g10168_i0 PRJNA767802 10241 223 1.568966 3.49879418 Victivallales bacterium 2212475 Bacteria Bacteria 41.2 0.0326   NR MDD3118912.1 2212475 g10168 i0 38 0.672645739910314 50 31 67.3 0 181 32 35 84 MDD3118912.1 hypothetical protein [Victivallales bacterium] diamond 150 41.2 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
26926677 26926677 PRJNA767802_P_NODE_18482_length_162_cov_0.902655_g18409_i0 PRJNA767802 18482 162 0.902655 1.4623011 Botrimarina mediterranea 2528022 Bacteria Bacteria 77 8.32e-15   NR WP_145116791.1 2528022 g18409 i0 72.2 1 54 13 100 1 1 162 289 340 WP_145116791.1 DUF1559 domain-containing protein [Botrimarina mediterranea] diamond 162 77 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Lacipirellulaceae Botrimarina Botrimarina mediterranea
27337804 27337804 PRJNA767802_P_NODE_5763_length_334_cov_3.031579_g5690_i0 PRJNA767802 5763 334 3.031579 10.12547386 Candidatus Rhabdochlamydia sp. 2320511 Bacteria Bacteria 80.1 8.24e-15   NR MFI0477770.1 2320511 g5690 i0 54.1 0.664670658682635 74 34 66.5 0 78 299 25 98 MFI0477770.1 beta strand repeat-containing protein [Candidatus Rhabdochlamydia sp.] diamond 222 80.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae Candidatus Rhabdochlamydia Candidatus Rhabdochlamydia sp.
27432703 27432703 PRJNA767802_P_NODE_11163_length_211_cov_1.574074_g11090_i0 PRJNA767802 11163 211 1.574074 3.32129614 Pirellulaceae bacterium 2699754 Bacteria Bacteria 131 2e-34   NR MBC7856119.1 2699754 g11090 i0 94.2 0.981042654028436 69 4 98.1 0 3 209 310 378 MBC7856119.1 sigma-54-dependent Fis family transcriptional regulator [Pirellulaceae bacterium] diamond 207 131 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
27811566 27811566 PRJNA767802_P_NODE_4204_length_416_cov_1.915531_g4131_i0 PRJNA767802 4204 416 1.915531 7.96860896 Fimbriiglobus ruber 1908690 Bacteria Bacteria 127 9.47e-33   NR WP_161967608.1 1908690 g4131 i0 49.6 0.987980769230769 137 64 95.2 2 5 400 45 181 WP_161967608.1 c-type cytochrome [Fimbriiglobus ruber] diamond 411 127 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Fimbriiglobus Fimbriiglobus ruber
29927013 29927013 PRJNA767802_P_NODE_5991_length_326_cov_1.472924_g5918_i0 PRJNA767802 5991 326 1.472924 4.80173224 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 96.3 1.66e-20   NR MFM2169900.1 2026799 g5918 i0 60 0.920245398773006 100 40 92 0 19 318 493 592 MFM2169900.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 300 96.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30495697 30495697 PRJNA767802_P_NODE_1773_length_687_cov_1.719436_g1715_i0 PRJNA767802 1773 687 1.719436 11.81252532 Pirellulales bacterium 2715253 Bacteria Bacteria 268 3.059999999999999e-87   NR MFO0903704.1 2715253 g1715 i0 92 0.59825327510917 137 11 59.8 0 411 1 1 137 MFO0903704.1 glycosyltransferase [Pirellulales bacterium] diamond 411 268 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales     Pirellulales bacterium
30938052 30938052 PRJNA767802_P_NODE_8054_length_265_cov_1.879630_g7981_i0 PRJNA767802 8054 265 1.87963 4.9810195 Pirellulaceae bacterium 2699754 Bacteria Bacteria 172 1.29e-49   NR MBC7856119.1 2699754 g7981 i0 97.7 0.984905660377358 87 2 98.5 0 263 3 63 149 MBC7856119.1 sigma-54-dependent Fis family transcriptional regulator [Pirellulaceae bacterium] diamond 261 172 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
31759928 31759928 PRJNA767802_P_NODE_2137_length_620_cov_8.173380_g2074_i0 PRJNA767802 2137 620 8.17338 50.674956 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 148 2.87e-39   NR HEY5235189.1 2047756 g2074 i0 48.7 0.745161290322581 154 76 73.5 2 25 480 30 182 HEY5235189.1 nucleotidyltransferase domain-containing protein [Rhabdochlamydiaceae bacterium] diamond 462 148 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
32171465 32171465 PRJNA767802_P_NODE_4538_length_396_cov_2.239193_g4465_i0 PRJNA767802 4538 396 2.239193 8.86720428 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 148 2.31e-41   NR MEQ1851759.1 2811408 g4465 i0 89.6 0.583333333333333 77 8 58.3 0 395 165 205 281 MEQ1851759.1 AraC family transcriptional regulator [Chthoniobacteraceae bacterium] diamond 231 148 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
32181007 32181007 PRJNA767802_P_NODE_2538_length_565_cov_3.294574_g2470_i0 PRJNA767802 2538 565 3.294574 18.6143431 root 1 Root_unresolved Root_unresolved 82 1.85e-14   NR MCK4859262.1 2035772 g2470 i0 31.6 1.59823008849558 158 104 82.8 4 565 98 160 315 MCK4859262.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 903 82.4 0.995145631067961 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32266443 32266443 PRJNA767802_P_NODE_10038_length_226_cov_1.389831_g9965_i0 PRJNA767802 10038 226 1.389831 3.14101806 Pirellulaceae bacterium 2699754 Bacteria Bacteria 132 6.42e-34   NR MFN0018561.1 2699754 g9965 i0 91.8 0.969026548672566 73 6 96.9 0 7 225 31 103 MFN0018561.1 tetratricopeptide repeat protein [Pirellulaceae bacterium] diamond 219 132 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae   Pirellulaceae bacterium
32812441 32812441 PRJNA767802_P_NODE_4460_length_400_cov_4.339031_g4387_i0 PRJNA767802 4460 400 4.339031 17.356124 Pseudomonadati 3379134 Bacteria Bacteria 55.5 2.22e-6   NR MBN1442838.1 2026780 g4387 i0 43.6 2.31 101 53 75.8 1 1 303 63 159 MBN1442838.1 hypothetical protein [Planctomycetota bacterium] diamond 924 55.8 0.99462365591397806 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32865851 32865851 PRJNA767802_P_NODE_3400_length_479_cov_9.641860_g3328_i0 PRJNA767802 3400 479 9.64186 46.1845094 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 97.1 5.69e-20   NR MDB4663394.1 2026799 g3328 i0 59.7 0.482254697286013 77 28 48.2 1 252 22 35 108 MDB4663394.1 phage tail protein [Verrucomicrobiota bacterium] diamond 231 97.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32906857 32906857 PRJNA767802_P_NODE_3600_length_459_cov_2.475610_g3527_i0 PRJNA767802 3600 459 2.47561 11.3630499 Pseudomonadati 3379134 Bacteria Bacteria 64.3 2.94e-10   NR MCW8132934.1 2026780 g3527 i0 47 2.20915032679739 66 33 43.1 1 253 56 23 86 MCW8132934.1 SWIB/MDM2 domain-containing protein [Planctomycetota bacterium] diamond 1014 64.7 0.993817619783617 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;