contig_metadata
25 rows where bioproject = "PRJNA767802", tax_clade = "FCB group" and tax_kingdom = "Pseudomonadati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 745204 | 745204 | PRJNA767802_P_NODE_241_length_1587_cov_2.401170_g227_i0 | PRJNA767802 | 241 | 1587 | 2.40117 | 38.1065679 | Lacibacter sp. MH-610 | 3020883 | Bacteria | Bacteria | 2920 | 0 | NTclustered | gi|2865359271|gb|CP116002.1| | 3020883 | g227 | i0 | 99.874 | 1.94517958412098 | 1587 | 2 | 100 | 0 | 1 | 1587 | 3238301 | 3239887 | Lacibacter sp. MH-610 chromosome | blastn | 3087 | 2920 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Lacibacter | Lacibacter sp. MH-610 | |
| 2021217 | 2021217 | PRJNA767802_P_NODE_4002_length_430_cov_1.797900_g3929_i0 | PRJNA767802 | 4002 | 430 | 1.7979 | 7.73097 | Flavihumibacter stibioxidans | 1834163 | Bacteria | Bacteria | 195 | 1.54e-54 | NR | WP_187254985.1 | 1834163 | g3929 | i0 | 98.1 | 0.725581395348837 | 104 | 2 | 72.6 | 0 | 119 | 430 | 502 | 605 | WP_187254985.1 CusA/CzcA family heavy metal efflux RND transporter [Flavihumibacter stibioxidans] | diamond | 312 | 195 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Flavihumibacter | Flavihumibacter stibioxidans | |
| 21147778 | 21147778 | PRJNA767802_P_NODE_4557_length_394_cov_4.179710_g4484_i0 | PRJNA767802 | 4557 | 394 | 4.17971 | 16.4680574 | Sphingobacterium spiritivorum | 258 | Bacteria | Bacteria | 682 | 0 | NTclustered | gi|2636475595|gb|CP139978.1| | 258 | g4484 | i0 | 99.467 | 5.28680203045685 | 375 | 2 | 95 | 0 | 20 | 394 | 4324637 | 4324263 | Sphingobacterium spiritivorum strain HAMBI_1896 chromosome, complete genome | blastn | 2083 | 682 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | Sphingobacterium spiritivorum | |
| 22422524 | 22422524 | PRJNA767802_P_NODE_9338_length_238_cov_1.074074_g9265_i0 | PRJNA767802 | 9338 | 238 | 1.074074 | 2.55629612 | Aquirufa nivalisilvae | 2516557 | Bacteria | Bacteria | 303 | 5.35e-78 | NTclustered | gi|1390254249|gb|CP029346.1| | 2516557 | g9265 | i0 | 91.441 | 342.894957983193 | 222 | 17 | 93 | 2 | 18 | 238 | 360769 | 360989 | Aquirufa nivalisilvae strain HME7025 chromosome, complete genome | blastn | 81609 | 303 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa nivalisilvae | |
| 23698154 | 23698154 | PRJNA767802_P_NODE_4359_length_406_cov_4.481793_g4286_i0 | PRJNA767802 | 4359 | 406 | 4.481793 | 18.19607958 | Cloacibacterium sp. | 1913682 | Bacteria | Bacteria | 186 | 5.029999999999999e-54 | NR | MFN4076187.1 | 1913682 | g4286 | i0 | 89.1 | 1.60344827586207 | 110 | 12 | 81.3 | 0 | 360 | 31 | 336 | 445 | MFN4076187.1 OmpA family protein [Cloacibacterium sp.] | diamond | 651 | 186 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Cloacibacterium | Cloacibacterium sp. | |
| 26704821 | 26704821 | PRJNA767802_P_NODE_4921_length_373_cov_2.913580_g4848_i0 | PRJNA767802 | 4921 | 373 | 2.91358 | 10.8676534 | Maribacter sp. 221 | 1897614 | Bacteria | Bacteria | 99.8 | 1.76e-21 | NR | WP_413969516.1 | 3386272 | g4848 | i0 | 39.3 | 0.981233243967828 | 122 | 73 | 97.3 | 1 | 365 | 3 | 167 | 288 | WP_413969516.1 hypothetical protein [Maribacter sp. 2210JD10-5] | diamond | 366 | 99.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Maribacter | Maribacter sp. 2210JD10-5 | |
| 26895233 | 26895233 | PRJNA767802_P_NODE_14281_length_180_cov_1.374046_g14208_i0 | PRJNA767802 | 14281 | 180 | 1.374046 | 2.4732828 | Tenacibaculum sp. SZ-18 | 754423 | Bacteria | Bacteria | 45.4 | 0.00148 | NR | WP_157811690.1 | 754423 | g14208 | i0 | 41.5 | 1.8 | 53 | 31 | 88.3 | 0 | 2 | 160 | 144 | 196 | WP_157811690.1 hypothetical protein [Tenacibaculum sp. SZ-18] | diamond | 324 | 45.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Tenacibaculum | Tenacibaculum sp. SZ-18 | |
| 27021619 | 27021619 | PRJNA767802_P_NODE_7822_length_270_cov_1.348416_g7749_i0 | PRJNA767802 | 7822 | 270 | 1.348416 | 3.6407232 | uncultured Aquimarina sp. | 575652 | Bacteria | Bacteria | 68.2 | 6e-11 | NR | WP_299609184.1 | 575652 | g7749 | i0 | 63.5 | 1.6 | 52 | 19 | 57.8 | 0 | 239 | 84 | 1998 | 2049 | WP_299609184.1 T9SS type B sorting domain-containing protein [uncultured Aquimarina sp.] | diamond | 432 | 68.2 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Aquimarina | uncultured Aquimarina sp. | |
| 27116225 | 27116225 | PRJNA767802_P_NODE_3262_length_491_cov_7.993213_g3191_i0 | PRJNA767802 | 3262 | 491 | 7.993213 | 39.24667583 | Ferruginibacter sp. | 1940288 | Bacteria | Bacteria | 162 | 3.01e-46 | NR | HEX2682415.1 | 1940288 | g3191 | i0 | 48.2 | 1.0142566191446 | 166 | 77 | 95.9 | 2 | 1 | 471 | 21 | 186 | HEX2682415.1 hypothetical protein [Ferruginibacter sp.] | diamond | 498 | 162 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Ferruginibacter | Ferruginibacter sp. | |
| 27242820 | 27242820 | PRJNA767802_P_NODE_3463_length_472_cov_5.248227_g3391_i0 | PRJNA767802 | 3463 | 472 | 5.248227 | 24.77163144 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 99 | 4.9900000000000006e-21 | NR | MCR9290574.1 | 1898104 | g3391 | i0 | 44.1 | 5.49152542372881 | 143 | 73 | 90.3 | 2 | 442 | 17 | 152 | 288 | MCR9290574.1 phage integrase N-terminal SAM-like domain-containing protein [Bacteroidota bacterium] | diamond | 2592 | 99 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 27337803 | 27337803 | PRJNA767802_P_NODE_15843_length_167_cov_1.728814_g15770_i0 | PRJNA767802 | 15843 | 167 | 1.728814 | 2.88711938 | Saprospiraceae bacterium | 2202734 | Bacteria | Bacteria | 42 | 0.0253 | NR | MCC6816024.1 | 2202734 | g15770 | i0 | 50 | 1.31137724550898 | 30 | 15 | 53.9 | 0 | 3 | 92 | 80 | 109 | MCC6816024.1 T9SS type A sorting domain-containing protein [Saprospiraceae bacterium] | diamond | 219 | 42 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Saprospiria | Saprospirales | Saprospiraceae | Saprospiraceae bacterium | ||
| 27401016 | 27401016 | PRJNA767802_P_NODE_16543_length_166_cov_0.871795_g16470_i0 | PRJNA767802 | 16543 | 166 | 0.871795 | 1.4471797 | Bacteroidia bacterium | 2044936 | Bacteria | Bacteria | 44.7 | 0.00129 | NR | MBL7934166.1 | 2044936 | g16470 | i0 | 74.1 | 0.487951807228916 | 27 | 7 | 48.8 | 0 | 84 | 164 | 1 | 27 | MBL7934166.1 4Fe-4S binding protein [Bacteroidia bacterium] | diamond | 81 | 44.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidia bacterium | ||||
| 27600115 | 27600115 | PRJNA767802_P_NODE_4384_length_405_cov_2.674157_g4311_i0 | PRJNA767802 | 4384 | 405 | 2.674157 | 10.83033585 | Puia | 2045098 | Bacteria | Bacteria | 120 | 3.7899999999999997e-31 | NR | MBK7883588.1 | 1869212 | g4311 | i0 | 46 | 1.88148148148148 | 126 | 65 | 93.3 | 1 | 7 | 384 | 17 | 139 | MBK7883588.1 hypothetical protein [Chitinophagaceae bacterium] | diamond | 762 | 120 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 27821124 | 27821124 | PRJNA767802_P_NODE_9424_length_236_cov_1.737968_g9351_i0 | PRJNA767802 | 9424 | 236 | 1.737968 | 4.10160448 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 72 | 1.72e-13 | NR | MEO6941123.1 | 2447898 | g9351 | i0 | 49.2 | 2.33898305084746 | 63 | 32 | 80.1 | 0 | 223 | 35 | 115 | 177 | MEO6941123.1 lipocalin family protein [Candidatus Kapaibacterium sp.] | diamond | 552 | 72 | 1 | Bacteria | FCB group | Pseudomonadati | Candidatus Kapaibacteriota | Candidatus Kapaibacteriia | Candidatus Kapaibacteriales | Candidatus Kapaibacteriaceae | Candidatus Kapaibacterium | Candidatus Kapaibacterium sp. | |
| 28221634 | 28221634 | PRJNA767802_P_NODE_4186_length_417_cov_2.328804_g4113_i0 | PRJNA767802 | 4186 | 417 | 2.328804 | 9.71111268 | Ferruginibacter sp. | 1940288 | Bacteria | Bacteria | 157 | 2.17e-41 | NR | HEX2682422.1 | 1940288 | g4113 | i0 | 52.9 | 0.992805755395683 | 138 | 65 | 99.3 | 0 | 3 | 416 | 393 | 530 | HEX2682422.1 hypothetical protein [Ferruginibacter sp.] | diamond | 414 | 157 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Ferruginibacter | Ferruginibacter sp. | |
| 29232286 | 29232286 | PRJNA767802_P_NODE_2089_length_628_cov_3.053541_g2027_i0 | PRJNA767802 | 2089 | 628 | 3.053541 | 19.17623748 | Chitinophagaceae bacterium | 1869212 | Bacteria | Bacteria | 204 | 2.96e-60 | NR | MFM9908692.1 | 1869212 | g2027 | i0 | 67.4 | 0.687898089171974 | 144 | 47 | 68.8 | 0 | 609 | 178 | 273 | 416 | MFM9908692.1 oligosaccharide flippase family protein [Chitinophagaceae bacterium] | diamond | 432 | 204 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 29295310 | 29295310 | PRJNA767802_P_NODE_1269_length_818_cov_20.369311_g1222_i0 | PRJNA767802 | 1269 | 818 | 20.369311 | 166.62096398 | Paludibacteraceae bacterium | 2748031 | Bacteria | Bacteria | 187 | 1.8299999999999995e-54 | NR | HQJ91130.1 | 2748031 | g1222 | i0 | 48.1 | 0.663814180929095 | 181 | 93 | 66.4 | 1 | 818 | 276 | 80 | 259 | HQJ91130.1 DNA methyltransferase [Paludibacteraceae bacterium] | diamond | 543 | 187 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Paludibacteraceae | Paludibacteraceae bacterium | ||
| 29705355 | 29705355 | PRJNA767802_P_NODE_14150_length_181_cov_1.537879_g14077_i0 | PRJNA767802 | 14150 | 181 | 1.537879 | 2.78356099 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 107 | 1.23e-28 | NR | MBS1577785.1 | 1898104 | g14077 | i0 | 84.2 | 0.94475138121547 | 57 | 9 | 94.5 | 0 | 9 | 179 | 1 | 57 | MBS1577785.1 hypothetical protein [Bacteroidota bacterium] | diamond | 171 | 107 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 29705356 | 29705356 | PRJNA767802_P_NODE_1810_length_677_cov_6.226115_g1752_i0 | PRJNA767802 | 1810 | 677 | 6.226115 | 42.15079855 | Agriterribacter sp. | 2821509 | Bacteria | Bacteria | 165 | 4.95e-46 | NR | HRP30473.1 | 2821509 | g1752 | i0 | 52.4 | 0.633677991137371 | 143 | 67 | 63.4 | 1 | 674 | 246 | 163 | 304 | HRP30473.1 hypothetical protein [Agriterribacter sp.] | diamond | 429 | 165 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Agriterribacter | Agriterribacter sp. | |
| 30906484 | 30906484 | PRJNA767802_P_NODE_2394_length_587_cov_1.691450_g2329_i0 | PRJNA767802 | 2394 | 587 | 1.69145 | 9.9288115 | Flavobacterium psychrophilum | 96345 | Bacteria | Bacteria | 65.1 | 1.5e-8 | NR | WP_094163979.1 | 96345 | g2329 | i0 | 40 | 0.40885860306644 | 80 | 48 | 40.9 | 0 | 537 | 298 | 141 | 220 | WP_094163979.1 hypothetical protein [Flavobacterium psychrophilum] | diamond | 240 | 65.1 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium psychrophilum | |
| 31222035 | 31222035 | PRJNA767802_P_NODE_16215_length_167_cov_0.864407_g16142_i0 | PRJNA767802 | 16215 | 167 | 0.864407 | 1.44355969 | Chitinophaga sp. | 1869181 | Bacteria | Bacteria | 110 | 1.22e-28 | NR | MBA4196886.1 | 1869181 | g16142 | i0 | 100 | 0.988023952095808 | 55 | 0 | 98.8 | 0 | 167 | 3 | 117 | 171 | MBA4196886.1 hypothetical protein [Chitinophaga sp.] | diamond | 165 | 110 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophaga | Chitinophaga sp. | |
| 31854791 | 31854791 | PRJNA767802_P_NODE_14577_length_177_cov_1.593750_g14504_i0 | PRJNA767802 | 14577 | 177 | 1.59375 | 2.8209375 | Pedobacter sp. ASV12 | 2795120 | Bacteria | Bacteria | 65.5 | 1.45e-10 | NR | WP_199137422.1 | 2795120 | g14504 | i0 | 96.8 | 0.525423728813559 | 31 | 1 | 52.5 | 0 | 2 | 94 | 28 | 58 | WP_199137422.1 carboxypeptidase-like regulatory domain-containing protein [Pedobacter sp. ASV12] | diamond | 93 | 65.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Pedobacter | Pedobacter sp. ASV12 | |
| 31918160 | 31918160 | PRJNA767802_P_NODE_9377_length_237_cov_1.627660_g9304_i0 | PRJNA767802 | 9377 | 237 | 1.62766 | 3.8575542 | Flectobacillus sp. BAB-3569 | 1509483 | Bacteria | Bacteria | 163 | 4.28e-47 | NR | WP_095160086.1 | 1509483 | g9304 | i0 | 97.5 | 1 | 79 | 2 | 100 | 0 | 1 | 237 | 148 | 226 | WP_095160086.1 FIST signal transduction protein [Flectobacillus sp. BAB-3569] | diamond | 237 | 163 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Flectobacillus | Flectobacillus sp. BAB-3569 | |
| 32202943 | 32202943 | PRJNA767802_P_NODE_1298_length_807_cov_4.864116_g1250_i0 | PRJNA767802 | 1298 | 807 | 4.864116 | 39.25341612 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 100 | 9.61e-20 | NR | PCJ66674.1 | 1898104 | g1250 | i0 | 34.6 | 0.66542750929368 | 179 | 101 | 61 | 4 | 168 | 659 | 1693 | 1870 | PCJ66674.1 MAG: hypothetical protein COA58_04235 [Bacteroidota bacterium] | diamond | 537 | 100 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 32361358 | 32361358 | PRJNA767802_P_NODE_9219_length_240_cov_1.602094_g9146_i0 | PRJNA767802 | 9219 | 240 | 1.602094 | 3.8450256 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 42.7 | 0.0366 | NR | MBS1625871.1 | 1898104 | g9146 | i0 | 65.7 | 0.4375 | 35 | 12 | 43.8 | 0 | 194 | 90 | 579 | 613 | MBS1625871.1 tail fiber domain-containing protein [Bacteroidota bacterium] | diamond | 105 | 42.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;