RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA766854" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA766854 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5848498 5848498 PRJNA766854_P_NODE_2045_length_298_cov_4.386617_g1919_i0 PRJNA766854 2045 298 4.386617 13.07211866 Termitidicoccus mucosus 1184151 Bacteria Bacteria 183 9.41e-42   NTclustered gi|2724066732|gb|CP109796.1| 1184151 g1919 i0 94.215 46.6677852348993 121 6 40 1 179 298 5636817 5636937 Termitidicoccus mucosus strain TSB47 chromosome, complete genome blastn 13907 183 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Termitidicoccus Termitidicoccus mucosus
7123707 7123707 PRJNA766854_P_NODE_66_length_1007_cov_12.182004_g53_i0 PRJNA766854 66 1007 12.182004 122.67278028 Ruficoccus sp. ZRK36 2866311 Bacteria Bacteria 542 4.97e-149   NTclustered gi|2080888260|gb|CP080649.1| 2866311 g53 i0 80.397 141.98311817279 755 112 73 24 126 859 381788 381049 Ruficoccus sp. ZRK36 chromosome, complete genome blastn 142977 542 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Puniceicoccales Cerasicoccaceae Ruficoccus Ruficoccus sp. ZRK36
9673422 9673422 PRJNA766854_P_NODE_2088_length_295_cov_3.338346_g1962_i0 PRJNA766854 2088 295 3.338346 9.8481207 Termitidicoccus mucosus 1184151 Bacteria Bacteria 183 9.309999999999998e-42   NTclustered gi|2724066732|gb|CP109796.1| 1184151 g1962 i0 94.215 47.1423728813559 121 6 41 1 176 295 5636817 5636937 Termitidicoccus mucosus strain TSB47 chromosome, complete genome blastn 13907 183 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Termitidicoccus Termitidicoccus mucosus
21147508 21147508 PRJNA766854_P_NODE_2037_length_299_cov_3.203704_g1911_i0 PRJNA766854 2037 299 3.203704 9.57907496 Termitidicoccus mucosus 1184151 Bacteria Bacteria 183 9.449999999999998e-42   NTclustered gi|2724066732|gb|CP109796.1| 1184151 g1911 i0 94.215 47.3612040133779 121 6 40 1 180 299 5636817 5636937 Termitidicoccus mucosus strain TSB47 chromosome, complete genome blastn 14161 183 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Termitidicoccus Termitidicoccus mucosus
22422245 22422245 PRJNA766854_P_NODE_1578_length_330_cov_3.504983_g1453_i0 PRJNA766854 1578 330 3.504983 11.5664439 Termitidicoccus mucosus 1184151 Bacteria Bacteria 183 1.06e-41   NTclustered gi|2724066732|gb|CP109796.1| 1184151 g1453 i0 94.215 39.1151515151515 121 6 36 1 211 330 5636817 5636937 Termitidicoccus mucosus strain TSB47 chromosome, complete genome blastn 12908 183 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Termitidicoccus Termitidicoccus mucosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;