RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where bioproject = "PRJNA766854" and tax_phylum = "Uroviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA766854 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3296215 3296215 PRJNA766854_P_NODE_1903_length_306_cov_4.043321_g1778_i0 PRJNA766854 1903 306 4.043321 12.37256226 Shockervirus shocker 3432426 Viruses Viruses 87.9 7.82e-13   NTclustered gi|2487592915|ref|NC_073470.1| 2805839 g1778 i0 90.769 0.212418300653595 65 6 21 0 181 245 40603 40539 Microbacterium phage Shocker, complete genome blastn 65 87.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Shockervirus Shockervirus shocker
7123669 7123669 PRJNA766854_P_NODE_1106_length_399_cov_10.327027_g985_i0 PRJNA766854 1106 399 10.327027 41.20483773 Shockervirus shocker 3432426 Viruses Viruses 67.6 1.36e-6   NTclustered gi|2487592915|ref|NC_073470.1| 2805839 g985 i0 87.931 0.290726817042607 58 5 14 2 88 144 484 428 Microbacterium phage Shocker, complete genome blastn 116 67.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Shockervirus Shockervirus shocker
9673412 9673412 PRJNA766854_P_NODE_1848_length_308_cov_2.946237_g1723_i0 PRJNA766854 1848 308 2.946237 9.07440996 Shockervirus shocker 3432426 Viruses Viruses 84.2 1.02e-11   NTclustered gi|2487592915|ref|NC_073470.1| 2805839 g1723 i0 94.444 0.175324675324675 54 3 18 0 193 246 41911 41858 Microbacterium phage Shocker, complete genome blastn 54 84.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Shockervirus Shockervirus shocker
9673418 9673418 PRJNA766854_P_NODE_18848_length_155_cov_4.412698_g18721_i0 PRJNA766854 18848 155 4.412698 6.8396819 Shockervirus shocker 3432426 Viruses Viruses 191 2.59e-44   NTclustered gi|2487592915|ref|NC_073470.1| 2805839 g18721 i0 98.165 0.703225806451613 109 2 70 0 2 110 41234 41126 Microbacterium phage Shocker, complete genome blastn 109 191 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Shockervirus Shockervirus shocker
12224643 12224643 PRJNA766854_P_NODE_630_length_493_cov_2.952586_g530_i0 PRJNA766854 630 493 2.952586 14.55624898 Shockervirus shocker 3432426 Viruses Viruses 80.5 2.21e-10   NTclustered gi|2487592915|ref|NC_073470.1| 2805839 g530 i0 95.918 0.0993914807302231 49 2 10 0 381 429 32077 32125 Microbacterium phage Shocker, complete genome blastn 49 80.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Shockervirus Shockervirus shocker
22422247 22422247 PRJNA766854_P_NODE_1678_length_321_cov_2.582192_g1553_i0 PRJNA766854 1678 321 2.582192 8.28883632 Shockervirus shocker 3432426 Viruses Viruses 145 4.83e-30   NTclustered gi|2487592915|ref|NC_073470.1| 2805839 g1553 i0 97.619 0.261682242990654 84 2 26 0 1 84 26786 26703 Microbacterium phage Shocker, complete genome blastn 84 145 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Shockervirus Shockervirus shocker
29800404 29800404 PRJNA766854_P_NODE_1791_length_312_cov_1.780919_g1666_i0 PRJNA766854 1791 312 1.780919 5.55646728 Microbacterium phage Shocker 2805839 Viruses Viruses 43.9 0.0319   NR YP_010755454.1 2805839 g1666 i0 90 0.192307692307692 20 2 19.2 0 125 66 118 137 YP_010755454.1 DNA primase/helicase [Microbacterium phage Shocker] diamond 60 43.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Shockervirus Shockervirus shocker
32897212 32897212 PRJNA766854_P_NODE_1520_length_336_cov_3.276873_g1395_i0 PRJNA766854 1520 336 3.276873 11.01029328 Microbacterium phage Shocker 2805839 Viruses Viruses 47.4 3.6e-4   NR YP_010755426.1 2805839 g1395 i0 84 0.223214285714286 25 4 22.3 0 79 5 45 69 YP_010755426.1 hypothetical protein QEH45_gp16 [Microbacterium phage Shocker] diamond 75 47.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Shockervirus Shockervirus shocker

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;