contig_metadata
9 rows where bioproject = "PRJNA766854" and tax_phylum = "Fusobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 744984 | 744984 | PRJNA766854_P_NODE_18621_length_212_cov_6.551913_g18494_i0 | PRJNA766854 | 18621 | 212 | 6.551913 | 13.89005556 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 270 | 4.729999999999999e-68 | NTclustered | gi|1708577445|dbj|AP019835.1| | 157687 | g18494 | i0 | 90.291 | 96.5377358490566 | 206 | 20 | 97 | 0 | 4 | 209 | 2369809 | 2369604 | Leptotrichia wadei JMUB3934 DNA, complete genome | blastn | 20466 | 270 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 2020986 | 2020986 | PRJNA766854_P_NODE_362_length_584_cov_139.974775_g289_i0 | PRJNA766854 | 362 | 584 | 139.974775 | 817.452686 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 1038 | 0 | NTclustered | gi|2201062197|gb|CP092519.1| | 188913 | g289 | i0 | 98.801 | 513.861301369863 | 584 | 6 | 100 | 1 | 1 | 584 | 49433 | 48851 | Cetobacterium somerae strain CS2105-BJ chromosome, complete genome | blastn | 300095 | 1038 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 7584048 | 7584048 | PRJNA766854_P_NODE_986_length_424_cov_1.045570_g871_i0 | PRJNA766854 | 986 | 424 | 1.04557 | 4.4332168 | Cetobacterium | 180162 | Bacteria | Bacteria | 119 | 3.97e-22 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g871 | i0 | 100 | 1.26179245283019 | 64 | 0 | 25 | 0 | 183 | 246 | 1901601 | 1901664 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 535 | 119 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 11409779 | 11409779 | PRJNA766854_P_NODE_1609_length_327_cov_1.929530_g1484_i0 | PRJNA766854 | 1609 | 327 | 1.92953 | 6.3095631 | Cetobacterium | 180162 | Bacteria | Bacteria | 132 | 3.84e-26 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g1484 | i0 | 85.816 | 3.05810397553517 | 141 | 0 | 61 | 1 | 3 | 143 | 1908575 | 1908695 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 1000 | 132 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 12685593 | 12685593 | PRJNA766854_P_NODE_1530_length_335_cov_2.552288_g1405_i0 | PRJNA766854 | 1530 | 335 | 2.552288 | 8.5501648 | Cetobacterium | 180162 | Bacteria | Bacteria | 141 | 6.55e-29 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g1405 | i0 | 100 | 6.61791044776119 | 76 | 0 | 58 | 0 | 84 | 159 | 481020 | 481095 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 2217 | 141 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 13498714 | 13498714 | PRJNA766854_P_NODE_2031_length_299_cov_267.274074_g1906_i0 | PRJNA766854 | 2031 | 299 | 267.274074 | 799.14948126 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 425 | 1.42e-114 | NTclustered | gi|2850954511|gb|CP173065.1| | 1319815 | g1906 | i0 | 92.333 | 497.09364548495 | 300 | 21 | 100 | 2 | 1 | 299 | 941035 | 941333 | Cetobacterium somerae ATCC BAA-474 chromosome | blastn | 148631 | 425 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 13498723 | 13498723 | PRJNA766854_P_NODE_291_length_623_cov_2.176768_g230_i0 | PRJNA766854 | 291 | 623 | 2.176768 | 13.56126464 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 161 | 9.84e-35 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g230 | i0 | 89.683 | 28.7736757624398 | 126 | 13 | 20 | 0 | 166 | 291 | 368360 | 368235 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 17926 | 161 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 18596676 | 18596676 | PRJNA766854_P_NODE_715_length_470_cov_2.589569_g609_i0 | PRJNA766854 | 715 | 470 | 2.589569 | 12.1709743 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 472 | 2.9599999999999997e-128 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g609 | i0 | 94.719 | 33.931914893617 | 303 | 16 | 89 | 0 | 62 | 364 | 67561 | 67259 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 15948 | 472 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 24157654 | 24157654 | PRJNA766854_P_NODE_39_length_1208_cov_359.394402_g15_i1 | PRJNA766854 | 39 | 1208 | 359.394402 | 4341.48437616 | Cetobacterium | 180162 | Bacteria | Bacteria | 1886 | 0 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g15 | i1 | 99.517 | 510.328642384106 | 1036 | 5 | 98 | 0 | 155 | 1190 | 279703 | 278668 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 616477 | 1886 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;