RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA766854", tax_kingdom = "Metazoa" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA766854 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1205905 1205905 PRJNA766854_P_NODE_17661_length_243_cov_1.238318_g17535_i0 PRJNA766854 17661 243 1.238318 3.00911274 Sarcoptiformes 83137 Arthropoda Arthropoda 185 2.0699999999999998e-42   NTclustered gi|2205489107|ref|XR_006959104.1| 6954 g17535 i0 100 60.0781893004115 100 0 61 0 144 243 788 887 PREDICTED: Dermatophagoides farinae small subunit ribosomal RNA (LOC124493228), rRNA blastn 14599 185 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Pyroglyphidae Dermatophagoides Dermatophagoides farinae
16047559 16047559 PRJNA766854_P_NODE_1473_length_342_cov_2.450479_g1348_i0 PRJNA766854 1473 342 2.450479 8.38063818 Daphnia galeata 27404 Arthropoda Arthropoda 281 3.790000000000001e-71   NTclustered gi|189172079|gb|EU595548.1| 27404 g1348 i0 100 60.8830409356725 152 0 61 0 190 341 521 370 Daphnia galeata 28S ribosomal RNA gene, partial sequence; 28S-18S ribosomal RNA intergenic spacer, complete sequence; and 18S ribosomal RNA gene, partial sequence blastn 20822 281 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia galeata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;