RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA766854", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA766854 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
744972 744972 PRJNA766854_P_NODE_1021_length_417_cov_3.829897_g904_i0 PRJNA766854 1021 417 3.829897 15.97067049 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 189 2.9299999999999993e-43   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g904 i0 97.297 1.76019184652278 111 3 54 0 302 412 5032672 5032562 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 734 189 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
22422266 22422266 PRJNA766854_P_NODE_38_length_1231_cov_3.634775_g30_i0 PRJNA766854 38 1231 3.634775 44.74408025 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 555 7.859999999999998e-153   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g30 i0 93.989 29.4321689683184 366 22 56 0 458 823 5032772 5032407 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 36231 555 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
24971602 24971602 PRJNA766854_P_NODE_420_length_559_cov_2.005660_g342_i0 PRJNA766854 420 559 2.00566 11.2116394 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 126 3.1999999999999998e-24   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g342 i0 91.304 27.2057245080501 92 8 39 0 465 556 5032274 5032183 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 15208 126 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;