RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA766854", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA766854 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7584014 7584014 PRJNA766854_P_NODE_18606_length_216_cov_3.518717_g18479_i0 PRJNA766854 18606 216 3.518717 7.60042872 Rosculus 373137 SAR_Eukaryotes SAR_Eukaryotes 207 3.84e-49   NTclustered gi|1336609552|gb|MG859939.1| 175275 g18479 i0 99.13 46.1296296296296 115 1 99 0 102 216 974 860 Uncultured Cercozoa isolate 1_map+ small subunit ribosomal RNA gene, partial sequence blastn 9964 207 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
23697920 23697920 PRJNA766854_P_NODE_18779_length_172_cov_5.286713_g18652_i0 PRJNA766854 18779 172 5.286713 9.09314636 Rosculus sp. VDelafont-2023a 3079709 SAR_Eukaryotes SAR_Eukaryotes 182 1.76e-41   NTclustered gi|2589370978|gb|OR644361.1| 3079709 g18652 i0 93.443 2.38372093023256 122 8 98 0 1 122 404 283 Rosculus sp. VDelafont-2023a isolate AJ1 small subunit ribosomal RNA gene, partial sequence blastn 410 182 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp. VDelafont-2023a

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;