RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA766854" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 3 ✖

bioproject 1

  • PRJNA766854 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3757730 3757730 PRJNA766854_P_NODE_1783_length_312_cov_2.356890_g1658_i0 PRJNA766854 1783 312 2.35689 7.3534968 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 89.8 2.22e-13   NTclustered gi|2031931912|emb|OD956618.1| 5763 g1658 i0 100 17.3942307692308 48 0 15 0 262 309 2615 2568 Naegleria fowleri Karachi_NF001 strain blastn 5427 89.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
17783574 17783574 PRJNA766854_P_NODE_834_length_447_cov_10.811005_g723_i0 PRJNA766854 834 447 10.811005 48.32519235 Naegleria 5761 Heterolobosea other_Eukaryota 62.1 7.19e-5   NTclustered gi|2031946985|emb|OD958550.1| 5763 g723 i0 100 7.10961968680089 33 0 7 0 204 236 4325 4357 Naegleria fowleri Karachi_NF001 strain blastn 3178 62.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
25432583 25432583 PRJNA766854_P_NODE_1540_length_334_cov_2.291803_g1415_i0 PRJNA766854 1540 334 2.291803 7.65462202 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 89.8 2.4e-13   NTclustered gi|2031937503|emb|OD957242.1| 5763 g1415 i0 100 23.5688622754491 48 0 14 0 284 331 1622 1575 Naegleria fowleri Karachi_NF001 strain blastn 7872 89.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;