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contig_metadata

23 rows where bioproject = "PRJNA764222" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 23 ✖

bioproject 1

  • PRJNA764222 · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1205783 1205783 PRJNA764222_S_NODE_6981_length_287_cov_7.887500_g6823_i0 PRJNA764222 6981 287 7.8875 22.637125 Copiparvovirus 1511888 Viruses Viruses 520 6.049999999999999e-143   NTclustered gi|1725344901|ref|NC_031959.2| 1917013 g6823 i0 99.303 4.56445993031359 287 2 100 0 1 287 5306 5020 Bosavirus MS-2016a, complete genome blastn 1310 520 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Copiparvovirus Copiparvovirus ungulate5
2020708 2020708 PRJNA764222_S_NODE_2342_length_387_cov_5.723529_g2184_i0 PRJNA764222 2342 387 5.723529 22.15005723 Zebrafish picornavirus 1 2304617 Viruses Viruses 682 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g2184 i0 98.45 3 387 6 100 0 1 387 5715 6101 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1161 682 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
2020869 2020869 PRJNA764222_S_NODE_642_length_789_cov_115.111860_g525_i0 PRJNA764222 642 789 115.11186 908.2325754 Zebrafish picornavirus 1 2304617 Viruses Viruses 1380 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g525 i0 98.228 3.51584283903676 790 12 100 2 1 789 7449 8237 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 2774 1380 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
4573178 4573178 PRJNA764222_S_NODE_684_length_755_cov_11.381356_g562_i0 PRJNA764222 684 755 11.381356 85.9292378 Zebrafish picornavirus 1 2304617 Viruses Viruses 1297 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g562 i0 97.742 2.99205298013245 753 17 99 0 1 753 5046 4294 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 2259 1297 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
7123302 7123302 PRJNA764222_S_NODE_14146_length_238_cov_1.078534_g13988_i0 PRJNA764222 14146 238 1.078534 2.56691092 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g13988 i0 100 0.592436974789916 29 0 12 0 210 238 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
8398084 8398084 PRJNA764222_S_NODE_7987_length_278_cov_3.142857_g7829_i0 PRJNA764222 7987 278 3.142857 8.73714246 Zebrafish picornavirus 1 2304617 Viruses Viruses 486 5.919999999999998e-133   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g7829 i0 98.201 2.99640287769784 278 5 100 0 1 278 6158 6435 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 833 486 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
13498579 13498579 PRJNA764222_S_NODE_51_length_3420_cov_29.450341_g42_i0 PRJNA764222 51 3420 29.450341 1007.2016622 Zebrafish picornavirus 1 2304617 Viruses Viruses 5541 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g42 i0 95.912 3.00438596491228 3425 131 100 7 1 3420 96 3516 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 10275 5541 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
14773744 14773744 PRJNA764222_S_NODE_52_length_3420_cov_27.912541_g42_i1 PRJNA764222 52 3420 27.912541 954.6089022 Zebrafish picornavirus 1 2304617 Viruses Viruses 5546 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g42 i1 95.942 3.00438596491228 3425 130 100 8 1 3420 3503 83 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 10275 5546 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
17323079 17323079 PRJNA764222_S_NODE_28654_length_174_cov_1.622047_g28496_i0 PRJNA764222 28654 174 1.622047 2.82236178 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 230 6.299999999999999e-56   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g28496 i0 94.04 0.867816091954023 151 9 87 0 21 171 1442 1592 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 151 230 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
17323208 17323208 PRJNA764222_S_NODE_9014_length_270_cov_1.650224_g8856_i0 PRJNA764222 9014 270 1.650224 4.4556048 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 416 7.619999999999998e-112   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g8856 i0 94.444 1 270 15 100 0 1 270 2417 2148 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 270 416 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
18596583 18596583 PRJNA764222_S_NODE_9175_length_269_cov_1.193694_g9017_i0 PRJNA764222 9175 269 1.193694 3.21103686 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.025   NTclustered gi|1995060321|gb|MN450069.1| 12164 g9017 i0 100 0.104089219330855 28 0 10 0 1 28 14 41 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
19871332 19871332 PRJNA764222_S_NODE_1236_length_527_cov_61.160417_g1084_i0 PRJNA764222 1236 527 61.160417 322.31539759 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 723 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g1084 i0 91.412 0.994307400379507 524 45 99 0 1 524 6586 7109 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 524 723 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
21147416 21147416 PRJNA764222_S_NODE_757_length_709_cov_7.564955_g629_i0 PRJNA764222 757 709 7.564955 53.63553095 Zebrafish picornavirus 1 2304617 Viruses Viruses 1205 0   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g629 i0 97.32 3 709 19 100 0 1 709 3505 4213 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 2127 1205 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
22421933 22421933 PRJNA764222_S_NODE_20718_length_206_cov_1.660377_g20560_i0 PRJNA764222 20718 206 1.660377 3.42037662 Erythroparvovirus ungulate1 3052194 Viruses Viruses 381 2.0199999999999994e-101   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g20560 i0 100 8.97087378640777 206 0 100 0 1 206 3319 3524 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 1848 381 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
23697545 23697545 PRJNA764222_S_NODE_16739_length_224_cov_2.909605_g16581_i0 PRJNA764222 16739 224 2.909605 6.5175152 Caudoviricetes sp. 2832643 Viruses Viruses 52.8 0.02   NTclustered gi|2058103431|tpg|BK033609.1| 2832643 g16581 i0 100 0.125 28 0 13 0 193 220 40394 40367 MAG TPA_asm: Caudoviricetes sp. isolate ctq0U24, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
24971169 24971169 PRJNA764222_S_NODE_13500_length_241_cov_2.427835_g13342_i0 PRJNA764222 13500 241 2.427835 5.85108235 Erythroparvovirus ungulate1 3052194 Viruses Viruses 440 3.959999999999999e-119   NTclustered gi|2500352099|ref|NC_074970.1| 172297 g13342 i0 99.585 9.00829875518672 241 1 100 0 1 241 1963 2203 Bovine parvovirus 3 putative non-structural protein and putative capsid protein genes, complete cds blastn 2171 440 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Erythroparvovirus Erythroparvovirus ungulate1
26704812 26704812 PRJNA764222_S_NODE_18321_length_217_cov_2.029412_g18163_i0 PRJNA764222 18321 217 2.029412 4.40382404 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 87.8 3.68e-18   NR AVM87439.1 3063761 g18163 i0 56.9 0.995391705069124 72 31 99.5 0 217 2 949 1020 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 216 87.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
28221624 28221624 PRJNA764222_S_NODE_20006_length_209_cov_2.209877_g19848_i0 PRJNA764222 20006 209 2.209877 4.61864293 Bacillus phage AR9 1815509 Viruses Viruses 72.4 8.24e-13   NR YP_009283036.1 1815509 g19848 i0 58.5 0.933014354066986 65 26 93.3 1 13 207 112 175 YP_009283036.1 DNA polymerase [Bacillus phage AR9] diamond 195 72.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Takahashivirus Takahashivirus PBS1
29042902 29042902 PRJNA764222_S_NODE_28228_length_176_cov_1.178295_g28070_i0 PRJNA764222 28228 176 1.178295 2.0737992 Vibrio phage pVa-21 1958921 Viruses Viruses 65.9 1.05e-10   NR AQT28126.1 1958921 g28070 i0 90.9 0.5625 33 3 56.3 0 67 165 101 133 AQT28126.1 putative terminase large subunit [Vibrio phage pVa-21] diamond 99 65.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage pVa-21
29620191 29620191 PRJNA764222_S_NODE_29510_length_171_cov_1.661290_g29352_i0 PRJNA764222 29510 171 1.66129 2.8408059 root 1 Root_unresolved Root_unresolved 80.9 9.33e-18   NR DAL45530.1 2832643 g29352 i0 64.3 1.96491228070175 56 20 98.2 0 169 2 39 94 DAL45530.1 MAG TPA_asm: hypothetical protein [Caudoviricetes sp.] diamond 336 81.3 0.995079950799508 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30116282 30116282 PRJNA764222_S_NODE_31472_length_165_cov_1.211864_g31314_i0 PRJNA764222 31472 165 1.211864 1.9995756 Faustovirus 1477405 Viruses Viruses 44.3 0.00327   NR QJX72331.1 1477405 g31314 i0 40 2.45454545454545 45 27 81.8 0 143 9 11 55 QJX72331.1 ubiquitin-conjugating enzyme E2 [Faustovirus] diamond 405 44.3 1 Viruses               Faustovirus
31064500 31064500 PRJNA764222_S_NODE_16735_length_224_cov_3.016949_g16577_i0 PRJNA764222 16735 224 3.016949 6.75796576 Klebsiella phage 2583037 Viruses Viruses 66.6 1.06e-10   NR BBK09217.1 2583037 g16577 i0 53.6 1.55357142857143 56 26 75 0 177 10 166 221 BBK09217.1 ADP-ribosylation [Klebsiella phage 05F01] diamond 348 66.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Klebsiella phage 05F01
31358508 31358508 PRJNA764222_S_NODE_8856_length_271_cov_2.316964_g8698_i0 PRJNA764222 8856 271 2.316964 6.27897244 root 1 Root_unresolved Root_unresolved 47.8 1.07e-4   NR ARB06284.1 1965372 g8698 i0 70 0.863468634686347 30 9 33.2 0 44 133 2 31 ARB06284.1 hypothetical protein SppYZU01_47 [Shewanella phage SppYZU01] diamond 234 47.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Shewanella phage SppYZU01

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;