contig_metadata
5 rows where bioproject = "PRJNA764222", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10948875 | 10948875 | PRJNA764222_S_NODE_28449_length_175_cov_1.226562_g28291_i0 | PRJNA764222 | 28449 | 175 | 1.226562 | 2.1464835 | Anaeromyxobacteraceae bacterium | 2510643 | Bacteria | Bacteria | 104 | 3.0499999999999998e-24 | NR | HSN13013.1 | 2510643 | g28291 | i0 | 85.7 | 4.74857142857143 | 56 | 8 | 96 | 0 | 8 | 175 | 120 | 175 | HSN13013.1 NADP-dependent malic enzyme [Anaeromyxobacteraceae bacterium] | diamond | 831 | 104 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacteraceae bacterium | |||
| 27590516 | 27590516 | PRJNA764222_S_NODE_11044_length_256_cov_1.583732_g10886_i0 | PRJNA764222 | 11044 | 256 | 1.583732 | 4.05435392 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 50.1 | 1.15e-4 | NR | MDR2893224.1 | 2026735 | g10886 | i0 | 58.8 | 2.19140625 | 34 | 14 | 39.8 | 0 | 104 | 3 | 1709 | 1742 | MDR2893224.1 translocation/assembly module TamB domain-containing protein [Deltaproteobacteria bacterium] | diamond | 561 | 50.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27653639 | 27653639 | PRJNA764222_S_NODE_23224_length_195_cov_2.844595_g23066_i0 | PRJNA764222 | 23224 | 195 | 2.844595 | 5.54696025 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 72.8 | 4.97e-13 | NR | GHV53272.1 | 2026735 | g23066 | i0 | 58.1 | 0.953846153846154 | 62 | 26 | 95.4 | 0 | 191 | 6 | 1017 | 1078 | GHV53272.1 hypothetical protein FACS1894206_03630 [Deltaproteobacteria bacterium] | diamond | 186 | 72.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30969656 | 30969656 | PRJNA764222_S_NODE_26234_length_183_cov_2.823529_g26076_i0 | PRJNA764222 | 26234 | 183 | 2.823529 | 5.16705807 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 42.4 | 0.0229 | NR | MBW2732640.1 | 2026735 | g26076 | i0 | 41.3 | 0.754098360655738 | 46 | 26 | 73.8 | 1 | 142 | 8 | 489 | 534 | MBW2732640.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 138 | 42.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32139694 | 32139694 | PRJNA764222_S_NODE_3018_length_353_cov_1.313725_g2860_i0 | PRJNA764222 | 3018 | 353 | 1.313725 | 4.63744925 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 144 | 1.3e-39 | NR | MBW1645232.1 | 2026735 | g2860 | i0 | 63 | 2.57507082152974 | 108 | 40 | 91.8 | 0 | 325 | 2 | 8 | 115 | MBW1645232.1 tripartite tricarboxylate transporter substrate binding protein [Deltaproteobacteria bacterium] | diamond | 909 | 144 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;