RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA764222", tax_kingdom = "Pseudomonadati" and tax_phylum = "Nitrospirota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrospirota · 2 ✖

tax_kingdom 1

  • Pseudomonadati · 2 ✖

bioproject 1

  • PRJNA764222 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27442370 27442370 PRJNA764222_S_NODE_10103_length_262_cov_2.348837_g9945_i0 PRJNA764222 10103 262 2.348837 6.15395294 root 1 Root_unresolved Root_unresolved 97.4 2.77e-21   NR WP_085053744.1 1748249 g9945 i0 59.5 7.8206106870229 84 32 96.2 1 11 262 201 282 WP_085053744.1 heavy metal translocating P-type ATPase [Candidatus Magnetominusculus xianensis] diamond 2049 97.4 1 Bacteria   Pseudomonadati Nitrospirota Nitrospiria Nitrospirales Nitrospiraceae Candidatus Magnetominusculus Candidatus Magnetominusculus xianensis
28853056 28853056 PRJNA764222_S_NODE_18388_length_217_cov_1.470588_g18230_i0 PRJNA764222 18388 217 1.470588 3.19117596 Dissulfurispiraceae bacterium 2952959 Bacteria Bacteria 42.7 0.0271   NR HMK56992.1 2952959 g18230 i0 32.4 0.981566820276498 71 48 98.2 0 216 4 487 557 HMK56992.1 autotransporter domain-containing protein [Dissulfurispiraceae bacterium] diamond 213 42.7 1 Bacteria   Pseudomonadati Nitrospirota Thermodesulfovibrionia Thermodesulfovibrionales Dissulfurispiraceae   Dissulfurispiraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;