RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA764222", tax_kingdom = "Metazoa" and tax_phylum = "Xenacoelomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Xenacoelomorpha · 1 ✖

tax_kingdom 1

  • Metazoa · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA764222 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17783399 17783399 PRJNA764222_S_NODE_27254_length_179_cov_2.750000_g27096_i0 PRJNA764222 27254 179 2.75 4.9225 Metazoa 33208 Xenacoelomorpha other_Eukaryota 54.7 0.004   NTclustered gi|378781048|emb|FR837802.1| 996744 g27096 i0 96.875 0.547486033519553 32 1 18 0 1 32 2114 2083 Notocelis gullmarensis partial 28S rRNA gene, specimen voucher UJ07-37 blastn 98 54.7 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Otocelididae Notocelis Notocelis gullmarensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;