RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA764222" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 2 ✖

bioproject 1

  • PRJNA764222 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7123448 7123448 PRJNA764222_S_NODE_26006_length_184_cov_2.087591_g25848_i0 PRJNA764222 26006 184 2.087591 3.84116744 Chaetophoropsis pisiformis 1675661 Plants Plants 56.5 0.001   NTclustered gi|1835312527|gb|MN701163.1| 1675661 g25848 i0 100 0.16304347826087 30 0 16 0 121 150 66915 66886 Chaetophoropsis pisiformis strain FACHB-2289 chloroplast blastn 30 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chaetophorales Chaetophoraceae Chaetophoropsis Chaetophoropsis pisiformis
8397764 8397764 PRJNA764222_S_NODE_12607_length_246_cov_2.537688_g12449_i0 PRJNA764222 12607 246 2.537688 6.24271248 Chlorella vulgaris 3077 Plants Plants 353 5.44e-93   NTclustered gi|2838689404|gb|PQ043348.1| 3077 g12449 i0 93.061 9.7520325203252 245 12 99 3 1 245 19856 20095 Chlorella vulgaris strain BAC9706 mitochondrion, complete genome blastn 2399 353 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;