RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA764222", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA764222 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1205798 1205798 PRJNA764222_S_NODE_9721_length_265_cov_1.665138_g9563_i0 PRJNA764222 9721 265 1.665138 4.4126157 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|124804411|ref|XM_001347959.1| 36329 g9563 i0 96.875 0.362264150943396 32 1 12 0 224 255 425 394 Plasmodium falciparum 3D7 conserved Plasmodium protein, unknown function (PF3D7_1131400), partial mRNA blastn 96 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
7123391 7123391 PRJNA764222_S_NODE_20986_length_205_cov_1.335443_g20828_i0 PRJNA764222 20986 205 1.335443 2.73765815 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 342 9.489999999999999e-90   NTclustered gi|1624698140|ref|XM_029013938.1| 189622 g20828 i0 96.618 200.926829268293 207 5 100 1 1 205 503 297 Babesia ovata Retrovirus-related Pol poly LINE-1, putative (BOVATA_050210), partial mRNA blastn 41190 342 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
18596373 18596373 PRJNA764222_S_NODE_22695_length_197_cov_3.106667_g22537_i0 PRJNA764222 22695 197 3.106667 6.12013399 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|921131479|ref|XM_013584821.1| 51315 g22537 i0 100 0.147208121827411 29 0 15 0 24 52 1784 1756 Eimeria necatrix hypothetical protein partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
30653352 30653352 PRJNA764222_S_NODE_2133_length_403_cov_2.668539_g1975_i0 PRJNA764222 2133 403 2.668539 10.75421217 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.037   NR XP_022810819.1 5861 g1975 i0 33.1 0.945409429280397 127 81 91.6 3 385 17 95 221 XP_022810819.1 PIR protein [Plasmodium yoelii] diamond 381 44.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;