RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA764222", tax_clade = "Opisthokonta" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA764222 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27211044 27211044 PRJNA764222_S_NODE_102_length_2545_cov_36.663731_g81_i0 PRJNA764222 102 2545 36.663731 933.09195395 Anncaliia algerae PRA339 1288291 Fungi Fungi 51.6 0.0231   NR KCZ80447.1 1288291 g81 i0 28.6 0.437328094302554 185 103 19.7 6 1663 1163 1006 1179 KCZ80447.1 hypothetical protein H312_02171 [Anncaliia algerae PRA339] diamond 1113 51.6 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Anncaliia Anncaliia algerae
30021762 30021762 PRJNA764222_S_NODE_22211_length_199_cov_4.059211_g22053_i0 PRJNA764222 22211 199 4.059211 8.07782989 Nematocida sp. AWRm77 2670344 Fungi Fungi 42.4 0.011   NR KAI5189085.1 2670344 g22053 i0 43.4 0.798994974874372 53 26 79.9 2 160 2 18 66 KAI5189085.1 hypothetical protein NECID01_0440 [Nematocida sp. AWRm77] diamond 159 42.4 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida sp. AWRm77
31918143 31918143 PRJNA764222_S_NODE_13757_length_240_cov_1.601036_g13599_i0 PRJNA764222 13757 240 1.601036 3.8424864 Hepatospora eriocheir 1081669 Fungi Fungi 57.8 1.44e-8   NR ORD96474.1 1081669 g13599 i0 42.3 0.975 78 42 96.3 2 240 10 1 76 ORD96474.1 hypothetical protein HERIO_1589 [Hepatospora eriocheir] diamond 234 57.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Hepatosporidae Hepatospora Hepatospora eriocheir

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;