RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA764222", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA764222 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
744578 744578 PRJNA764222_S_NODE_13901_length_239_cov_2.145833_g13743_i0 PRJNA764222 13901 239 2.145833 5.12854087 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|2917940737|emb|OZ237566.1| 6108 g13743 i0 100 0.121338912133891 29 0 12 0 34 62 9233213 9233185 Anemonia sulcata genome assembly, chromosome: 12 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
5848317 5848317 PRJNA764222_S_NODE_3105_length_350_cov_2.234323_g2947_i0 PRJNA764222 3105 350 2.234323 7.8201305 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.033   NTclustered gi|2917940737|emb|OZ237566.1| 6108 g2947 i0 100 0.08 28 0 8 0 127 154 8150386 8150413 Anemonia sulcata genome assembly, chromosome: 12 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
18596509 18596509 PRJNA764222_S_NODE_3655_length_334_cov_5.425087_g3497_i0 PRJNA764222 3655 334 5.425087 18.11979058 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 52.8 0.031   NTclustered gi|1603825712|ref|XM_028561550.1| 151771 g3497 i0 100 0.0838323353293413 28 0 8 0 307 334 755 728 PREDICTED: Dendronephthya gigantea caspase-9-like (LOC114541744), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
21147257 21147257 PRJNA764222_S_NODE_25437_length_186_cov_2.640288_g25279_i0 PRJNA764222 25437 186 2.640288 4.91093568 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 54.7 0.004   NTclustered gi|2729079992|ref|XM_065202419.1| 499914 g25279 i0 100 0.155913978494624 29 0 16 0 129 157 111 139 PREDICTED: Rhopilema esculentum uncharacterized LOC135686226 (LOC135686226), transcript variant X2, mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;