RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA764222" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA764222 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3296146 3296146 PRJNA764222_S_NODE_783_length_696_cov_14.526965_g653_i0 PRJNA764222 783 696 14.526965 101.1076764 Bacteria 2 Bacteria Bacteria 115 1.58e-25   NR MEO5948866.1 1917697 g653 i0 47.2 6.60775862068965 144 73 61.2 2 603 178 816 958 MEO5948866.1 type I restriction endonuclease subunit R [Candidatus Saccharimonas sp.] diamond 4599 116 0.991379310344828 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
9673163 9673163 PRJNA764222_S_NODE_23768_length_193_cov_1.924658_g23610_i0 PRJNA764222 23768 193 1.924658 3.71458994 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 52.8 0.017   NTclustered gi|2874253989|emb|OY970314.1| 2026804 g23610 i0 100 0.145077720207254 28 0 15 0 141 168 686784 686811 MAG: Candidatus Woesebacteria bacterium isolate MFD01299.bin.c.5 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;