RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA763718" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA763718 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21146722 21146722 PRJNA763718_S_NODE_3237_length_248_cov_22.791469_g3029_i0 PRJNA763718 3237 248 22.791469 56.52284312 Myriotrochus sp. AKM-2016 1902928 Echinodermata other_Eukaryota 172 1.6499999999999999e-38   NTclustered gi|1160550711|gb|KX856867.1| 1902928 g3029 i0 87.755 59.2661290322581 147 18 59 0 1 147 417 563 Myriotrochus sp. AKM-2016 voucher NIWA:37812 28S ribosomal RNA gene, partial sequence blastn 14698 172 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Apodida Myriotrochidae Myriotrochus Myriotrochus sp. AKM-2016
31918126 31918126 PRJNA763718_S_NODE_4317_length_211_cov_15.695402_g4109_i0 PRJNA763718 4317 211 15.695402 33.11729822 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 40.8 0.0348   NR KAJ8043773.1 206669 g4109 i0 55.6 0.511848341232227 36 16 51.2 0 9 116 64 99 KAJ8043773.1 hypothetical protein HOLleu_11030 [Holothuria leucospilota] diamond 108 40.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;