RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA763718", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA763718 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8397435 8397435 PRJNA763718_S_NODE_6147_length_176_cov_1.654676_g5939_i0 PRJNA763718 6147 176 1.654676 2.91222976 Zychaea mexicana 64656 Fungi Fungi 161 2.3599999999999997e-35   NTclustered gi|2432181197|ref|XM_053119686.1| 64656 g5939 i0 83.721 3.84659090909091 172 26 97 2 6 176 224 54 Zychaea mexicana 60S ribosomal protein L19-B (BDB00DRAFT_767651), partial mRNA blastn 677 161 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
21146726 21146726 PRJNA763718_S_NODE_4897_length_198_cov_1.888199_g4689_i0 PRJNA763718 4897 198 1.888199 3.73863402 Lichtheimia corymbifera 42458 Fungi Fungi 169 1.63e-37   NTclustered gi|225131089|gb|FJ345350.1| 42458 g4689 i0 81.633 103.222222222222 196 33 99 2 3 198 3428 3236 Mycocladus corymbiferus strain ATCC 14058 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20438 169 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia corymbifera
31190260 31190260 PRJNA763718_S_NODE_1895_length_343_cov_4.454248_g1687_i0 PRJNA763718 1895 343 4.454248 15.27807064 Gigaspora rosea 44941 Fungi Fungi 61.6 1.4e-9   NR RIA99826.1 44941 g1687 i0 53.2 1.68804664723032 62 29 54.2 0 191 6 2 63 RIA99826.1 hypothetical protein C2G38_1995017 [Gigaspora rosea] diamond 579 61.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora rosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;