RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA763718", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA763718 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4572530 4572530 PRJNA763718_S_NODE_6224_length_175_cov_1.717391_g6016_i0 PRJNA763718 6224 175 1.717391 3.00543425 Plasmodium inui 52288 SAR_Eukaryotes SAR_Eukaryotes 141 3.06e-29   NTclustered gi|672189677|ref|XM_008816915.1| 1237626 g6016 i0 88.136 10.7485714285714 118 14 67 0 3 120 558 675 Plasmodium inui San Antonio 1 60S ribosomal protein L8 partial mRNA blastn 1881 141 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium inui
17322519 17322519 PRJNA763718_S_NODE_8614_length_151_cov_2.333333_g8406_i0 PRJNA763718 8614 151 2.333333 3.52333283 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 102 1.21e-17   NTclustered gi|2794937619|ref|XM_067858233.1| 5871 g8406 i0 94.03 23.887417218543 67 4 44 0 73 139 190 124 Babesia caballi fumarate reductase (BcabD6B2_17000), partial mRNA blastn 3607 102 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;