RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA763718", tax_clade = "Amoebozoa" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 4 ✖

tax_clade 1

  • Amoebozoa · 4 ✖

bioproject 1

  • PRJNA763718 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3295447 3295447 PRJNA763718_S_NODE_6043_length_178_cov_0.886525_g5835_i0 PRJNA763718 6043 178 0.886525 1.5780145 Angulamoeba fungorum 1654979 Evosea other_Eukaryota 329 6.21e-86   NTclustered gi|821394115|gb|KP864084.1| 1654979 g5835 i0 100 80.747191011236 178 0 100 0 1 178 568 391 Angulamoeba fungorum isolate 23-6A small subunit ribosomal RNA gene, partial sequence blastn 14373 329 1 Eukaryota Amoebozoa   Evosea Variosea     Angulamoeba Angulamoeba fungorum
12223903 12223903 PRJNA763718_S_NODE_8750_length_150_cov_1.964602_g8542_i0 PRJNA763718 8750 150 1.964602 2.946903 Dictyostelium purpureum 5786 Evosea other_Eukaryota 119 1.19e-22   NTclustered gi|330794885|ref|XM_003285459.1| 5786 g8542 i0 83.871 2.24 124 20 83 0 1 124 191 314 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_46140), partial mRNA blastn 336 119 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
17322493 17322493 PRJNA763718_S_NODE_2034_length_328_cov_7.082474_g1826_i0 PRJNA763718 2034 328 7.082474 23.23051472 Heterostelium album 2086695 Evosea other_Eukaryota 285 2.7899999999999995e-72   NTclustered gi|1160555578|ref|XM_020573614.1| 670386 g1826 i0 82.609 100.198170731707 322 56 98 0 7 328 559 880 Polysphondylium pallidum PN500 actin partial mRNA blastn 32865 285 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
27306199 27306199 PRJNA763718_S_NODE_8283_length_154_cov_1.136752_g8075_i0 PRJNA763718 8283 154 1.136752 1.75059808 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 53.9 2.12e-7   NR XP_637824.1 352472 g8075 i0 77.4 0.603896103896104 31 7 60.4 0 59 151 56 86 XP_637824.1 profilin II [Dictyostelium discoideum AX4] diamond 93 53.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;