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contig_metadata

12 rows where bioproject = "PRJNA763718" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA763718 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2020234 2020234 PRJNA763718_S_NODE_882_length_579_cov_8.199262_g693_i0 PRJNA763718 882 579 8.199262 47.47372698 Vannella ebro 207334 Discosea other_Eukaryota 411 8.19e-110   NTclustered gi|33946344|gb|AY294151.1| 207334 g693 i0 79.693 93.8877374784111 586 105 100 14 1 579 451 1029 Vannella ebro actin mRNA, complete cds blastn 54361 411 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
3295446 3295446 PRJNA763718_S_NODE_563_length_804_cov_36.288136_g415_i0 PRJNA763718 563 804 36.288136 291.75661344 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 477 1.1199999999999999e-129   NTclustered gi|221185864|gb|FJ577811.1| 590481 g415 i0 97.842 28.9713930348259 278 3 89 3 528 804 583 308 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 23293 477 1 Eukaryota Amoebozoa             uncultured Amoebozoa
3295447 3295447 PRJNA763718_S_NODE_6043_length_178_cov_0.886525_g5835_i0 PRJNA763718 6043 178 0.886525 1.5780145 Angulamoeba fungorum 1654979 Evosea other_Eukaryota 329 6.21e-86   NTclustered gi|821394115|gb|KP864084.1| 1654979 g5835 i0 100 80.747191011236 178 0 100 0 1 178 568 391 Angulamoeba fungorum isolate 23-6A small subunit ribosomal RNA gene, partial sequence blastn 14373 329 1 Eukaryota Amoebozoa   Evosea Variosea     Angulamoeba Angulamoeba fungorum
4572540 4572540 PRJNA763718_S_NODE_844_length_596_cov_10.468694_g659_i0 PRJNA763718 844 596 10.468694 62.39341624 Stenamoeba dejonckheerei 2730938 Discosea other_Eukaryota 167 2.02e-36   NTclustered gi|1835259542|gb|MT386405.1| 2730938 g659 i0 80.252 19.6040268456376 238 34 40 9 361 596 1679 1905 Stenamoeba dejonckheerei strain 32 small subunit ribosomal RNA gene, partial sequence blastn 11684 167 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Stenamoeba Stenamoeba dejonckheerei
12223903 12223903 PRJNA763718_S_NODE_8750_length_150_cov_1.964602_g8542_i0 PRJNA763718 8750 150 1.964602 2.946903 Dictyostelium purpureum 5786 Evosea other_Eukaryota 119 1.19e-22   NTclustered gi|330794885|ref|XM_003285459.1| 5786 g8542 i0 83.871 2.24 124 20 83 0 1 124 191 314 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_46140), partial mRNA blastn 336 119 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
14773107 14773107 PRJNA763718_S_NODE_1112_length_494_cov_27.341357_g907_i0 PRJNA763718 1112 494 27.341357 135.06630358 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 521 3.059999999999999e-143   NTclustered gi|365928255|gb|JN825705.1| 590481 g907 i0 92.837 44.4878542510121 363 21 73 5 133 494 1041 683 Uncultured Amoebozoa clone Alchichica_AQ2b_5E_39 small subunit ribosomal RNA gene, partial sequence blastn 21977 521 1 Eukaryota Amoebozoa             uncultured Amoebozoa
16508291 16508291 PRJNA763718_S_NODE_4273_length_212_cov_26.462857_g4065_i0 PRJNA763718 4273 212 26.462857 56.10125684 Vexillifera 218659 Root_unresolved Root_unresolved 172 1.37e-38   NTclustered gi|221185864|gb|FJ577811.1| 590481 g4065 i0 81.739 40.5754716981132 230 21 100 18 1 212 1551 1325 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 8602 172 1 Eukaryota Amoebozoa             uncultured Amoebozoa
17322493 17322493 PRJNA763718_S_NODE_2034_length_328_cov_7.082474_g1826_i0 PRJNA763718 2034 328 7.082474 23.23051472 Heterostelium album 2086695 Evosea other_Eukaryota 285 2.7899999999999995e-72   NTclustered gi|1160555578|ref|XM_020573614.1| 670386 g1826 i0 82.609 100.198170731707 322 56 98 0 7 328 559 880 Polysphondylium pallidum PN500 actin partial mRNA blastn 32865 285 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
17322508 17322508 PRJNA763718_S_NODE_594_length_779_cov_29.146900_g443_i0 PRJNA763718 594 779 29.1469 227.054351 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 462 3.05e-125   NTclustered gi|221185864|gb|FJ577811.1| 590481 g443 i0 91.168 29.1681643132221 351 15 74 13 310 647 664 1011 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 22722 462 1 Eukaryota Amoebozoa             uncultured Amoebozoa
17783031 17783031 PRJNA763718_S_NODE_4434_length_208_cov_11.035088_g4226_i0 PRJNA763718 4434 208 11.035088 22.95298304 Vexillifera 218659 Root_unresolved Root_unresolved 226 1.01e-54   NTclustered gi|221185864|gb|FJ577811.1| 590481 g4226 i0 93.421 52.5961538461538 152 10 73 0 57 208 1648 1799 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 10940 226 1 Eukaryota Amoebozoa             uncultured Amoebozoa
27306199 27306199 PRJNA763718_S_NODE_8283_length_154_cov_1.136752_g8075_i0 PRJNA763718 8283 154 1.136752 1.75059808 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 53.9 2.12e-7   NR XP_637824.1 352472 g8075 i0 77.4 0.603896103896104 31 7 60.4 0 59 151 56 86 XP_637824.1 profilin II [Dictyostelium discoideum AX4] diamond 93 53.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
29295288 29295288 PRJNA763718_S_NODE_8029_length_156_cov_0.983193_g7821_i0 PRJNA763718 8029 156 0.983193 1.53378108 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.9 1.14e-17   NR XP_004352947.1 1257118 g7821 i0 72.5 3.94230769230769 51 14 98.1 0 4 156 59 109 XP_004352947.1 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3), putative [Acanthamoeba castellanii str. Neff] diamond 615 80.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;