RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA763243" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA763243 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3294728 3294728 PRJNA763243_P_NODE_46203_length_262_cov_2.095238_g45857_i0 PRJNA763243 46203 262 2.095238 5.48952356 brine shrimp yue-like virus 9 2900461 Viruses Viruses 451 2.02e-122   NTclustered gi|2209095310|gb|OL472861.1| 2900461 g45857 i0 97.719 3.01145038167939 263 5 100 1 1 262 1100 838 MAG: Brine shrimp yue-like virus 9 isolate SH/98 segment 2 hypothetical protein gene, complete cds blastn 789 451 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 9
16045655 16045655 PRJNA763243_P_NODE_27713_length_311_cov_2.151261_g27367_i0 PRJNA763243 27713 311 2.151261 6.69042171 brine shrimp yue-like virus 9 2900461 Viruses Viruses 566 8.389999999999998e-157   NTclustered gi|2209095310|gb|OL472861.1| 2900461 g27367 i0 100 2.94855305466238 306 0 98 0 3 308 184 489 MAG: Brine shrimp yue-like virus 9 isolate SH/98 segment 2 hypothetical protein gene, complete cds blastn 917 566 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 9
18594922 18594922 PRJNA763243_P_NODE_39795_length_277_cov_3.245098_g39449_i0 PRJNA763243 39795 277 3.245098 8.98892146 brine shrimp yue-like virus 9 2900461 Viruses Viruses 501 2.11e-137   NTclustered gi|2209095310|gb|OL472861.1| 2900461 g39449 i0 99.635 2.96750902527076 274 1 99 0 4 277 559 832 MAG: Brine shrimp yue-like virus 9 isolate SH/98 segment 2 hypothetical protein gene, complete cds blastn 822 501 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 9
21146611 21146611 PRJNA763243_P_NODE_73737_length_203_cov_6.361538_g73391_i0 PRJNA763243 73737 203 6.361538 12.91392214 brine shrimp yue-like virus 9 2900461 Viruses Viruses 348 2.0100000000000006e-91   NTclustered gi|2209095310|gb|OL472861.1| 2900461 g73391 i0 98 1.95073891625616 200 4 99 0 1 200 1067 1266 MAG: Brine shrimp yue-like virus 9 isolate SH/98 segment 2 hypothetical protein gene, complete cds blastn 396 348 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;