RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA763243", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 7 ✖

tax_phylum 1

  • Duplornaviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA763243 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2019366 2019366 PRJNA763243_P_NODE_41022_length_274_cov_2.786070_g40676_i0 PRJNA763243 41022 274 2.78607 7.6338318 Cypovirus altineae 3428163 Viruses Viruses 451 2.12e-122   NTclustered gi|3115397|gb|AF061199.1|AF061199 110829 g40676 i0 96.679 7.86496350364964 271 9 99 0 4 274 446 716 Bombyx mori cytoplasmic polyhedrosis virus strain I nonstructural protein 5 gene, complete cds blastn 2155 451 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Cypovirus Cypovirus altineae
3294906 3294906 PRJNA763243_P_NODE_54703_length_248_cov_2.605714_g54357_i0 PRJNA763243 54703 248 2.605714 6.46217072 Cypovirus altineae 3428163 Viruses Viruses 453 5.2600000000000005e-123   NTclustered gi|284810245|gb|GU323605.1| 110829 g54357 i0 100 3.95161290322581 245 0 99 0 1 245 1867 1623 Bombyx mori cypovirus 1 strain Suzhou segment 1, complete sequence blastn 980 453 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Cypovirus Cypovirus altineae
3295152 3295152 PRJNA763243_P_NODE_65903_length_235_cov_2.839506_g65557_i0 PRJNA763243 65903 235 2.839506 6.6728391 Cypovirus altineae 3428163 Viruses Viruses 398 2.349999999999999e-106   NTclustered gi|261260466|gb|GQ924587.1| 110829 g65557 i0 97.826 2.93617021276596 230 5 98 0 3 232 1854 2083 Bombyx mori cypovirus 1 segment 3 unknown gene blastn 690 398 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Cypovirus Cypovirus altineae
10947435 10947435 PRJNA763243_P_NODE_41529_length_273_cov_1.520000_g41183_i0 PRJNA763243 41529 273 1.52 4.1496 Cypovirus altineae 3428163 Viruses Viruses 497 2.68e-136   NTclustered gi|284810245|gb|GU323605.1| 110829 g41183 i0 100 3.94139194139194 269 0 99 0 4 272 2567 2299 Bombyx mori cypovirus 1 strain Suzhou segment 1, complete sequence blastn 1076 497 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Cypovirus Cypovirus altineae
10947522 10947522 PRJNA763243_P_NODE_45269_length_264_cov_2.366492_g44923_i0 PRJNA763243 45269 264 2.366492 6.24753888 Cypovirus altineae 3428163 Viruses Viruses 475 1.2099999999999996e-129   NTclustered gi|240015233|gb|GQ150539.1| 110829 g44923 i0 99.617 1.97727272727273 261 0 99 1 1 261 716 457 Bombyx mori cypovirus 1 strain Suzhou segment 8 non-structural protein gene, complete cds blastn 522 475 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Cypovirus Cypovirus altineae
13497467 13497467 PRJNA763243_P_NODE_59271_length_244_cov_3.105263_g58925_i0 PRJNA763243 59271 244 3.105263 7.57684172 Cypovirus altineae 3428163 Viruses Viruses 435 1.87e-117   NTclustered gi|942528242|gb|KR704195.1| 110829 g58925 i0 99.174 2.97131147540984 242 1 99 1 1 241 3003 2762 Bombyx mori cypovirus 1 segment 2, complete sequence blastn 725 435 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Cypovirus Cypovirus altineae
24969879 24969879 PRJNA763243_P_NODE_38720_length_280_cov_1.908213_g38374_i0 PRJNA763243 38720 280 1.908213 5.3429964 Cypovirus altineae 3428163 Viruses Viruses 507 4.58e-139   NTclustered gi|284810247|gb|GU323606.1| 110829 g38374 i0 99.639 2.96428571428571 277 1 99 0 1 277 2555 2279 Bombyx mori cypovirus 1 strain Suzhou segment 4, complete sequence blastn 830 507 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Cypovirus Cypovirus altineae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;