RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA763243" and tax_kingdom = "Thermoproteati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA763243 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10948171 10948171 PRJNA763243_P_NODE_72549_length_208_cov_6.948148_g72203_i0 PRJNA763243 72549 208 6.948148 14.45214784 Candidatus Nitrosocosmicus franklandianus 1798806 Archaea Archaea 309 9.79e-80   NTclustered gi|1599533355|emb|LR216287.1| 1798806 g72203 i0 94.118 23.6105769230769 204 11 98 1 1 203 2055 2258 Candidatus Nitrosocosmicus franklandus isolate NFRAN1 genome assembly, chromosome: NFRAN blastn 4911 309 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus franklandianus
28663888 28663888 PRJNA763243_P_NODE_72587_length_208_cov_5.266667_g72241_i0 PRJNA763243 72587 208 5.266667 10.95466736 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 42.4 0.0309   NR MDH5439964.1 2026714 g72241 i0 38.9 0.778846153846154 54 32 76.4 1 12 170 145 198 MDH5439964.1 amidohydrolase family protein [Candidatus Bathyarchaeota archaeon] diamond 162 42.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
28948219 28948219 PRJNA763243_P_NODE_7248_length_540_cov_9.434690_g6908_i0 PRJNA763243 7248 540 9.43469 50.947326 Thermoproteota archaeon 2056631 Archaea Archaea 195 1.8499999999999997e-57   NR MDQ6723712.1 2056631 g6908 i0 57.8 0.922222222222222 166 70 92.2 0 534 37 30 195 MDQ6723712.1 CDP-glycerol glycerophosphotransferase family protein [Thermoproteota archaeon] diamond 498 195 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;