RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA763243", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 7 ✖

tax_kingdom 1

  • Fungi · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA763243 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6309426 6309426 PRJNA763243_P_NODE_845_length_1295_cov_58.334697_g703_i0 PRJNA763243 845 1295 58.334697 755.43432615 Eukaryota 2759 Fungi Fungi 183 4.499999999999999e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g703 i0 95.652 10.5505791505791 115 4 9 1 121 235 5650 5537 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13663 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
12223539 12223539 PRJNA763243_P_NODE_64570_length_239_cov_6.066265_g64224_i0 PRJNA763243 64570 239 6.066265 14.49837335 Pseudoloma neurophilia 146866 Fungi Fungi 433 6.57e-117   NTclustered gi|11993647|gb|AF322654.1| 146866 g64224 i0 99.578 98.2887029288703 237 1 99 0 1 237 1140 904 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23491 433 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
13959395 13959395 PRJNA763243_P_NODE_9751_length_478_cov_1331.044444_g9408_i0 PRJNA763243 9751 478 1331.044444 6362.39244232 Opisthokonta 33154 Fungi Fungi 63.9 2.15e-5   NTclustered gi|2735587414|ref|XR_010574014.1| 6039 g9408 i0 97.297 7.95188284518828 37 1 8 0 4 40 2229 2265 Vairimorpha necatrix 5.8S-23S ribosomal RNA (VNE69_10801), rRNA blastn 3801 63.9 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix
14772117 14772117 PRJNA763243_P_NODE_36972_length_285_cov_1.165094_g36626_i0 PRJNA763243 36972 285 1.165094 3.3205179 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 75 5.62e-9   NTclustered gi|448278458|gb|KC137554.1| 1289055 g36626 i0 95.652 0.16140350877193 46 2 16 0 22 67 2917 2962 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 46 75 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
16508273 16508273 PRJNA763243_P_NODE_9753_length_478_cov_289.980247_g9410_i0 PRJNA763243 9753 478 289.980247 1386.10558066 Opisthokonta 33154 Fungi Fungi 63.9 2.15e-5   NTclustered gi|2735587414|ref|XR_010574014.1| 6039 g9410 i0 97.297 7.95188284518828 37 1 8 0 439 475 2265 2229 Vairimorpha necatrix 5.8S-23S ribosomal RNA (VNE69_10801), rRNA blastn 3801 63.9 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix
18595740 18595740 PRJNA763243_P_NODE_7435_length_534_cov_2.902386_g7094_i0 PRJNA763243 7435 534 2.902386 15.49874124 Pseudoloma neurophilia 146866 Fungi Fungi 976 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g7094 i0 99.811 98.7116104868914 530 1 99 0 2 531 823 294 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 52712 976 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
25432035 25432035 PRJNA763243_P_NODE_860_length_1285_cov_61.463696_g703_i1 PRJNA763243 860 1285 61.463696 789.8084936 Eukaryota 2759 Fungi Fungi 183 4.47e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g703 i1 95.652 10.6326848249027 115 4 9 1 1051 1165 5537 5650 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13663 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;