RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA763243", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA763243 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9671290 9671290 PRJNA763243_P_NODE_22688_length_336_cov_3.148289_g22342_i0 PRJNA763243 22688 336 3.148289 10.57825104 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 427 4.51e-115   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g22342 i0 89.851 646.306547619048 335 30 99 4 1 333 5033760 5033428 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 217159 427 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
13497248 13497248 PRJNA763243_P_NODE_50471_length_253_cov_2.877778_g50125_i0 PRJNA763243 50471 253 2.877778 7.28077834 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 119 2.23e-22   NTclustered gi|2874254122|emb|OY970207.1| 3107663 g50125 i0 81.046 89.1067193675889 153 26 60 3 50 200 2164927 2165078 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD10113.bin.c.5 genome assembly, chromosome: 1 blastn 22544 119 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;