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contig_metadata

4 rows where bioproject = "PRJNA763243" and tax_clade = "sulfur-oxidizing symbionts"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • sulfur-oxidizing symbionts · 4 ✖

bioproject 1

  • PRJNA763243 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28884739 28884739 PRJNA763243_P_NODE_52108_length_251_cov_0.865169_g51762_i0 PRJNA763243 52108 251 0.865169 2.17157419 Bathymodiolus thermophilus thioautotrophic gill symbiont 2360 Bacteria Bacteria 152 1.82e-42   NR WP_139458397.1 2360 g51762 i0 83.1 1.9840637450199201 83 14 99.2 0 249 1 239 321 WP_139458397.1 O-succinylhomoserine sulfhydrylase [Bathymodiolus thermophilus thioautotrophic gill symbiont] diamond 498 152 1 Bacteria sulfur-oxidizing symbionts Pseudomonadati Pseudomonadota Gammaproteobacteria       Bathymodiolus thermophilus thioautotrophic gill symbiont
30242860 30242860 PRJNA763243_P_NODE_58652_length_245_cov_0.895349_g58306_i0 PRJNA763243 58652 245 0.895349 2.19360505 sulfur-oxidizing symbionts 32036 Bacteria Bacteria 165 1.45e-49   NR WP_090716630.1 32036 g58306 i0 97.5 0.991836734693878 81 2 99.2 0 243 1 97 177 WP_090716630.1 MULTISPECIES: 7-cyano-7-deazaguanine synthase QueC [sulfur-oxidizing symbionts] diamond 243 165 1 Bacteria sulfur-oxidizing symbionts Pseudomonadati Pseudomonadota Gammaproteobacteria        
31728202 31728202 PRJNA763243_P_NODE_57457_length_246_cov_0.890173_g57111_i0 PRJNA763243 57457 246 0.890173 2.18982558 sulfur-oxidizing symbionts 32036 Bacteria Bacteria 122 1.6499999999999995e-31   NR WP_090715769.1 32036 g57111 i0 80 0.853658536585366 70 14 85.4 0 37 246 1 70 WP_090715769.1 MULTISPECIES: DNA polymerase III subunit delta [sulfur-oxidizing symbionts] diamond 210 122 1 Bacteria sulfur-oxidizing symbionts Pseudomonadati Pseudomonadota Gammaproteobacteria        
32212604 32212604 PRJNA763243_P_NODE_59078_length_245_cov_0.860465_g58732_i0 PRJNA763243 59078 245 0.860465 2.10813925 Candidatus Thioglobus 655184 Bacteria Bacteria 109 9.86e-29   NR WP_090715407.1 32036 g58732 i0 82.8 1.42040816326531 58 10 71 0 243 70 74 131 WP_090715407.1 MULTISPECIES: preQ(1) synthase [sulfur-oxidizing symbionts] diamond 348 110 0.990909090909091 Bacteria sulfur-oxidizing symbionts Pseudomonadati Pseudomonadota Gammaproteobacteria        

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;