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contig_metadata

33 rows where bioproject = "PRJNA763243", tax_clade = "Sar" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 33 ✖

tax_clade 1

  • Sar · 33 ✖

bioproject 1

  • PRJNA763243 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
743307 743307 PRJNA763243_P_NODE_40621_length_275_cov_2.856436_g40275_i0 PRJNA763243 40621 275 2.856436 7.855199 Nitzschia palea 303400 SAR_Eukaryotes SAR_Eukaryotes 488 1.6299999999999995e-133   NTclustered gi|586947715|gb|KF913343.1| 303400 g40275 i0 99.262 3.76727272727273 271 0 99 2 2 272 781 513 Nitzschia palea strain M2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1036 488 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia palea
743342 743342 PRJNA763243_P_NODE_421_length_1684_cov_5.083799_g338_i0 PRJNA763243 421 1684 5.083799 85.61117516 Guinardia delicatula 1244696 SAR_Eukaryotes SAR_Eukaryotes 316 5.5699999999999985e-81   NTclustered gi|2074156200|gb|MW413905.1| 216802 g338 i0 75.066 28.0290973871734 754 151 44 30 160 892 23865 24602 Guinardia delicatula mitochondrion, complete genome blastn 47201 316 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Rhizosoleniales Rhizosoleniaceae Guinardia Guinardia delicatula
1205246 1205246 PRJNA763243_P_NODE_70041_length_220_cov_6.619048_g69695_i0 PRJNA763243 70041 220 6.619048 14.5619056 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 121 5.2699999999999997e-23   NTclustered gi|146762526|gb|EF553458.1| 2850 g69695 i0 81.935 34.5 155 17 70 6 66 220 4229 4086 Phaeodactylum tricornutum strain CCAP 1055/1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7590 121 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
10946841 10946841 PRJNA763243_P_NODE_1749_length_968_cov_4.800000_g1537_i0 PRJNA763243 1749 968 4.8 46.464 Phaeodactylum tricornutum CCAP 1 2850 SAR_Eukaryotes SAR_Eukaryotes 350 1.7299999999999999e-118   NR XP_002181180.1 556484 g1537 i0 79.2 6.22623966942149 212 44 65.7 0 36 671 6 217 XP_002181180.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] diamond 6027 350 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
10946867 10946867 PRJNA763243_P_NODE_18449_length_365_cov_30.123288_g18104_i0 PRJNA763243 18449 365 30.123288 109.9500012 Nitzschia palea 303400 SAR_Eukaryotes SAR_Eukaryotes 669 0   NTclustered gi|586947715|gb|KF913343.1| 303400 g18104 i0 100 7.9013698630137 362 0 99 0 4 365 110 471 Nitzschia palea strain M2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2884 669 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia palea
12223042 12223042 PRJNA763243_P_NODE_43950_length_267_cov_2.618557_g43604_i0 PRJNA763243 43950 267 2.618557 6.99154719 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 136 1.55e-36   NR KAI2499706.1 210448 g43604 i0 71.8 2.87640449438202 85 24 95.5 0 260 6 258 342 KAI2499706.1 GDP-mannose 4-6 dehydratase [Fragilaria crotonensis] diamond 768 137 0.992700729927007 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
13497466 13497466 PRJNA763243_P_NODE_59231_length_244_cov_4.187135_g58885_i0 PRJNA763243 59231 244 4.187135 10.2166094 Fragilariopsis cylindrus 186039 SAR_Eukaryotes SAR_Eukaryotes 211 3.43e-50   NTclustered gi|1783488149|ref|NC_045244.1| 186039 g58885 i0 83.929 69.5983606557377 224 32 91 4 7 228 33784 34005 Fragilariopsis cylindrus chloroplast, complete genome blastn 16982 211 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Fragilariopsis Fragilariopsis cylindrus
17321730 17321730 PRJNA763243_P_NODE_45634_length_263_cov_4.394737_g45288_i0 PRJNA763243 45634 263 4.394737 11.55815831 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 220 6.22e-53   NTclustered gi|657012566|gb|KF302620.1| 2850 g45288 i0 85.088 69.6882129277567 228 21 84 10 42 263 759 539 Phaeodactylum tricornutum clone C821 hypothetical protein mRNA, complete cds blastn 18328 220 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
18594706 18594706 PRJNA763243_P_NODE_30455_length_307_cov_9.337607_g30109_i0 PRJNA763243 30455 307 9.337607 28.66645349 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 124 1.42e-33   NR KAL3823683.1 382380 g30109 i0 75.9 3.09771986970684 79 19 77.2 0 7 243 86 164 KAL3823683.1 hypothetical protein ACHAXA_007254 [Cyclostephanos tholiformis] diamond 951 125 0.992 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclostephanos Cyclostephanos tholiformis
22419983 22419983 PRJNA763243_P_NODE_15518_length_392_cov_1.551724_g15173_i0 PRJNA763243 15518 392 1.551724 6.08275808 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 264 7.269999999999997e-88   NR CAJ1953473.1 2856 g15173 i0 90.8 5.96173469387755 130 12 99.5 0 3 392 83 212 CAJ1953473.1 unnamed protein product [Cylindrotheca closterium] diamond 2337 264 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
26904712 26904712 PRJNA763243_P_NODE_31961_length_301_cov_3.083333_g31615_i0 PRJNA763243 31961 301 3.083333 9.28083233 root 1 Root_unresolved Root_unresolved 156 2.3499999999999994e-42   NR KAK1744964.1 267567 g31615 i0 75.8 8.88039867109635 99 24 98.7 0 4 300 194 292 KAK1744964.1 glycine-tRNA ligase [Skeletonema marinoi] diamond 2673 157 0.993630573248408 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
27306179 27306179 PRJNA763243_P_NODE_51763_length_251_cov_1.213483_g51417_i0 PRJNA763243 51763 251 1.213483 3.04584233 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 55.1 2.25e-7   NR AID23596.1 2850 g51417 i0 63.4 0.49003984063745 41 15 49 0 6 128 77 117 AID23596.1 putative voltage-dependent anion-selective channel protein, partial [Phaeodactylum tricornutum] diamond 123 55.1 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
27347477 27347477 PRJNA763243_P_NODE_45343_length_264_cov_1.612565_g44997_i0 PRJNA763243 45343 264 1.612565 4.2571716 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 130 1.86e-33   NR KAL3816553.1 382380 g44997 i0 75.3 4.72727272727273 81 20 92 0 244 2 53 133 KAL3816553.1 hypothetical protein ACHAXA_011852 [Cyclostephanos tholiformis] diamond 1248 130 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclostephanos Cyclostephanos tholiformis
27905706 27905706 PRJNA763243_P_NODE_25065_length_323_cov_1.996000_g24719_i0 PRJNA763243 25065 323 1.996 6.44708 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 48.9 6.63e-4   NR KAK1746332.1 267567 g24719 i0 29.8 2.15479876160991 121 70 98.5 4 5 322 122 242 KAK1746332.1 signal peptide peptidase SPPA [Skeletonema marinoi] diamond 696 48.9 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
27905740 27905740 PRJNA763243_P_NODE_67005_length_231_cov_9.227848_g66659_i0 PRJNA763243 67005 231 9.227848 21.31632888 Fragilaria crotonensis 210448 SAR_Eukaryotes SAR_Eukaryotes 81.3 8.04e-16   NR KAI2503083.1 210448 g66659 i0 48.6 1.92207792207792 74 38 96.1 0 227 6 375 448 KAI2503083.1 hypothetical protein MHU86_11354 [Fragilaria crotonensis] diamond 444 81.3 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
28389210 28389210 PRJNA763243_P_NODE_4466_length_659_cov_5.319113_g4158_i0 PRJNA763243 4466 659 5.319113 35.05295467 root 1 Root_unresolved Root_unresolved 90.5 2.9e-19   NR YP_010047250.1 444606 g4158 i0 47.5 1.82094081942337 101 52 46 1 305 3 1 100 YP_010047250.1 ribosomal protein L14 [Eucampia zodiacus] diamond 1200 90.9 0.995599559955996 Eukaryota Sar   Bacillariophyta Mediophyceae Hemiaulales Hemiaulaceae Eucampia Eucampia zodiacus
28568997 28568997 PRJNA763243_P_NODE_49567_length_255_cov_1.994505_g49221_i0 PRJNA763243 49567 255 1.994505 5.08598775 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 83.6 1.8e-16   NR GFH45451.1 426638 g49221 i0 76 0.588235294117647 50 12 58.8 0 6 155 562 611 GFH45451.1 PLP-dependent transferase [Chaetoceros tenuissimus] diamond 150 83.6 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
28979679 28979679 PRJNA763243_P_NODE_21788_length_342_cov_1.089219_g21442_i0 PRJNA763243 21788 342 1.089219 3.72512898 Thalassiosira oceanica 159749 SAR_Eukaryotes SAR_Eukaryotes 130 1.61e-35   NR EJK47429.1 159749 g21442 i0 59.1 2.06140350877193 115 45 99.1 1 3 341 10 124 EJK47429.1 hypothetical protein THAOC_33854 [Thalassiosira oceanica] diamond 705 130 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira oceanica
29042822 29042822 PRJNA763243_P_NODE_12308_length_433_cov_3.063889_g11963_i0 PRJNA763243 12308 433 3.063889 13.26663937 Pseudo-nitzschia multistriata 183589 SAR_Eukaryotes SAR_Eukaryotes 93.2 7.17e-19   NR VEU42237.1 183589 g11963 i0 44.6 0.963048498845266 139 67 94.9 3 428 18 838 968 VEU42237.1 unnamed protein product [Pseudo-nitzschia multistriata] diamond 417 93.2 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Pseudo-nitzschia Pseudo-nitzschia multistriata
29273154 29273154 PRJNA763243_P_NODE_63269_length_241_cov_1.619048_g62923_i0 PRJNA763243 63269 241 1.619048 3.90190568 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 135 1.12e-35   NR KAL3789199.1 382360 g62923 i0 81.8 4.79253112033195 77 14 95.9 0 238 8 333 409 KAL3789199.1 hypothetical protein ACHAWO_013927 [Cyclotella atomus] diamond 1155 136 0.992647058823529 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella atomus
29651840 29651840 PRJNA763243_P_NODE_71770_length_212_cov_4.345324_g71424_i0 PRJNA763243 71770 212 4.345324 9.21208688 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 69.7 7.75e-12   NR KAG7352108.1 303405 g71424 i0 50.8 2.50471698113208 59 29 83.5 0 208 32 851 909 KAG7352108.1 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [Nitzschia inconspicua] diamond 531 69.7 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia inconspicua
30189123 30189123 PRJNA763243_P_NODE_71672_length_212_cov_12.820144_g71326_i0 PRJNA763243 71672 212 12.820144 27.17870528 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 117 1.33e-29   NR GFH48396.1 426638 g71326 i0 85.3 3.82075471698113 68 10 96.2 0 4 207 105 172 GFH48396.1 coproporphyrinogen III oxidase [Chaetoceros tenuissimus] diamond 810 117 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
30536762 30536762 PRJNA763243_P_NODE_6693_length_558_cov_2.150515_g6358_i0 PRJNA763243 6693 558 2.150515 11.9998737 Bacillariophyceae 33849 SAR_Eukaryotes SAR_Eukaryotes 253 7.51e-76   NR CAJ1958678.1 2856 g6358 i0 68.1 7.96774193548387 185 58 99.5 1 4 558 640 823 CAJ1958678.1 unnamed protein product [Cylindrotheca closterium] diamond 4446 253 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Cylindrotheca Cylindrotheca closterium
30558499 30558499 PRJNA763243_P_NODE_63273_length_241_cov_1.601190_g62927_i0 PRJNA763243 63273 241 1.60119 3.8588679 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.014   NR GFH44036.1 426638 g62927 i0 63 1.10788381742739 27 10 33.6 0 179 99 122 148 GFH44036.1 hypothetical protein CTEN210_00510 [Chaetoceros tenuissimus] diamond 267 43.9 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
30653312 30653312 PRJNA763243_P_NODE_47733_length_259_cov_1.494624_g47387_i0 PRJNA763243 47733 259 1.494624 3.87107616 Mayamaea pseudoterrestris 2872254 SAR_Eukaryotes SAR_Eukaryotes 141 1.1e-36   NR GKY92322.1 2872254 g47387 i0 78.8 1.85328185328185 80 17 92.7 0 247 8 834 913 GKY92322.1 hypothetical protein MPSEU_000203300 [Mayamaea pseudoterrestris] diamond 480 141 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Mayamaea Mayamaea pseudoterrestris
30843139 30843139 PRJNA763243_P_NODE_21454_length_344_cov_1.236162_g21108_i0 PRJNA763243 21454 344 1.236162 4.25239728 Mayamaea pseudoterrestris 2872254 SAR_Eukaryotes SAR_Eukaryotes 159 2.669999999999999e-43   NR GKY98155.1 2872254 g21108 i0 67.3 3.92441860465116 113 32 97.7 2 343 8 180 288 GKY98155.1 Inositol monophosphatase 2 [Mayamaea pseudoterrestris] diamond 1350 159 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Mayamaea Mayamaea pseudoterrestris
31221998 31221998 PRJNA763243_P_NODE_68395_length_227_cov_3.993506_g68049_i0 PRJNA763243 68395 227 3.993506 9.06525862 Fragilaria crotonensis 210448 SAR_Eukaryotes SAR_Eukaryotes 42 0.025   NR KAI2499486.1 210448 g68049 i0 51.4 0.488986784140969 37 18 48.9 0 224 114 76 112 KAI2499486.1 Plectin/S10 domain [Fragilaria crotonensis] diamond 111 42 1 Eukaryota Sar   Bacillariophyta Fragilariophyceae Fragilariales Fragilariaceae Fragilaria Fragilaria crotonensis
31823013 31823013 PRJNA763243_P_NODE_25617_length_320_cov_2.226721_g25271_i0 PRJNA763243 25617 320 2.226721 7.1255072 Cyclotella cryptica 29204 SAR_Eukaryotes SAR_Eukaryotes 74.7 1.51e-13   NR KAL3780735.1 29204 g25271 i0 42.2 2.64375 90 50 83.4 2 288 22 3 91 KAL3780735.1 hypothetical protein HJC23_001017 [Cyclotella cryptica] diamond 846 74.7 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Cyclotella Cyclotella cryptica
31832656 31832656 PRJNA763243_P_NODE_49297_length_256_cov_1.114754_g48951_i0 PRJNA763243 49297 256 1.114754 2.85377024 Bacillariophyta 2836 SAR_Eukaryotes SAR_Eukaryotes 118 8.73e-29   NR XP_002291581.1 296543 g48951 i0 63.4 1.9453125 82 30 96.1 0 3 248 400 481 XP_002291581.1 sugar transporter [Thalassiosira pseudonana CCMP1335] diamond 498 119 0.991596638655462 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Thalassiosiraceae Thalassiosira Thalassiosira pseudonana
31854740 31854740 PRJNA763243_P_NODE_41577_length_273_cov_1.360000_g41231_i0 PRJNA763243 41577 273 1.36 3.7128 Stephanodiscus triporus 2934178 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00456   NR KAL3774885.1 2934178 g41231 i0 36.4 0.725274725274725 66 42 72.5 0 74 271 4135 4200 KAL3774885.1 hypothetical protein ACHAW5_007303 [Stephanodiscus triporus] diamond 198 45.8 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Stephanodiscales Stephanodiscaceae Stephanodiscus Stephanodiscus triporus
31949571 31949571 PRJNA763243_P_NODE_26457_length_316_cov_1.736626_g26111_i0 PRJNA763243 26457 316 1.736626 5.48773816 Fistulifera solaris 1519565 SAR_Eukaryotes SAR_Eukaryotes 79 1.58e-14   NR GAX17022.1 1519565 g26111 i0 57.8 1.08227848101266 64 27 60.8 0 99 290 28 91 GAX17022.1 hypothetical protein FisN_5Hh406 [Fistulifera solaris] diamond 342 79 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Fistulifera Fistulifera solaris
32171403 32171403 PRJNA763243_P_NODE_27078_length_313_cov_2.529167_g26732_i0 PRJNA763243 27078 313 2.529167 7.91629271 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 59.7 9.79e-8   NR GFH60049.1 426638 g26732 i0 48.5 0.651757188498403 68 34 65.2 1 212 9 5065 5131 GFH60049.1 hypothetical protein CTEN210_16525 [Chaetoceros tenuissimus] diamond 204 59.7 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
32298169 32298169 PRJNA763243_P_NODE_67739_length_229_cov_3.339744_g67393_i0 PRJNA763243 67739 229 3.339744 7.64801376 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 88.2 3.08e-18   NR KAK1746238.1 267567 g67393 i0 60.6 1.88646288209607 71 28 93 0 12 224 5569 5639 KAK1746238.1 PA14 domain-containing protein [Skeletonema marinoi] diamond 432 88.2 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;