RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where bioproject = "PRJNA763243", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 17 ✖

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA763243 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2020163 2020163 PRJNA763243_P_NODE_8022_length_518_cov_2.644944_g7681_i0 PRJNA763243 8022 518 2.644944 13.70080992 Plasmodium berghei 5821 SAR_Eukaryotes SAR_Eukaryotes 387 1.22e-102   NTclustered gi|1843568304|ref|XM_034563737.1| 5823 g7681 i0 85.052 98.6602316602317 388 49 75 6 132 518 1 380 Plasmodium berghei ANKA polyubiquitin, putative (PBANKA_0610300), partial mRNA blastn 51106 387 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
3294782 3294782 PRJNA763243_P_NODE_49303_length_256_cov_1.071038_g48957_i0 PRJNA763243 49303 256 1.071038 2.74185728 Cryptosporidium bovis 310047 SAR_Eukaryotes SAR_Eukaryotes 56.5 0.002   NTclustered gi|2787666010|ref|XM_067327603.1| 310047 g48957 i0 92.308 0.265625 39 3 15 0 146 184 823 861 Cryptosporidium bovis uncharacterized protein (FG379_002000), partial mRNA blastn 68 56.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium bovis
5847482 5847482 PRJNA763243_P_NODE_6705_length_557_cov_9.803719_g6369_i0 PRJNA763243 6705 557 9.803719 54.60671483 Cystoisospora felis 482539 SAR_Eukaryotes SAR_Eukaryotes 167 1.88e-36   NTclustered gi|3323386|gb|U85705.1|IFU85705 482539 g6369 i0 92.982 20.4631956912029 114 8 20 0 41 154 2037 1924 Isospora felis 28S large subunit ribosomal RNA gene, complete sequence blastn 11398 167 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora felis
7122179 7122179 PRJNA763243_P_NODE_47246_length_260_cov_1.486631_g46900_i0 PRJNA763243 47246 260 1.486631 3.8652406 root 1 Root_unresolved Root_unresolved 125 3.25e-31   NR XP_951965.1 5874 g46900 i0 89.6 9 67 7 77.3 0 204 4 59 125 XP_951965.1 heat shock protein HSP70 homologue, putative [Theileria annulata] diamond 2340 126 0.992063492063492 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
8396193 8396193 PRJNA763243_P_NODE_25627_length_320_cov_2.052632_g25281_i0 PRJNA763243 25627 320 2.052632 6.5684224 root 1 Root_unresolved Root_unresolved 125 5.309999999999999e-31   NR XP_951965.1 5874 g25281 i0 89.6 10.865625 67 7 62.8 0 115 315 59 125 XP_951965.1 heat shock protein HSP70 homologue, putative [Theileria annulata] diamond 3477 126 0.992063492063492 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
9672297 9672297 PRJNA763243_P_NODE_64728_length_239_cov_2.126506_g64382_i0 PRJNA763243 64728 239 2.126506 5.08234934 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.021   NTclustered gi|1620172169|ref|XM_028682118.1| 880535 g64382 i0 92.308 0.163179916317992 39 0 16 2 7 44 9249 9213 Plasmodium sp. gorilla clade G2 conserved Plasmodium protein, unknown function (PADL01_1006600), partial mRNA blastn 39 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
12684889 12684889 PRJNA763243_P_NODE_35730_length_288_cov_4.451163_g35384_i0 PRJNA763243 35730 288 4.451163 12.81934944 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 67.6 9.51e-7   NTclustered gi|527046689|tpe|HG323591.1| 5807 g35384 i0 93.333 0.3125 45 3 16 0 176 220 156 200 TPA: Cryptosporidium parvum SRP RNA for signal recognition particle RNA blastn 90 67.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
13497086 13497086 PRJNA763243_P_NODE_43011_length_269_cov_19.755102_g42665_i0 PRJNA763243 43011 269 19.755102 53.14122438 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.3e-4   NTclustered gi|820698945|tpe|LN714498.1| 432359 g42665 i0 85.714 1.51301115241636 56 6 20 2 54 108 2293519 2293465 TPA_asm: Toxoplasma gondii VEG, chromosome chrVIII, complete genome blastn 407 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
16508185 16508185 PRJNA763243_P_NODE_61333_length_243_cov_0.905882_g60987_i0 PRJNA763243 61333 243 0.905882 2.20129326 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 70.1 4.14e-12   NR XP_013249403.1 5801 g60987 i0 72.1 0.530864197530864 43 12 53.1 0 190 62 218 260 XP_013249403.1 glycylpeptide N-tetradecanoyltransferase, putative [Eimeria acervulina] diamond 129 70.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
17320933 17320933 PRJNA763243_P_NODE_11334_length_449_cov_3.050532_g10991_i0 PRJNA763243 11334 449 3.050532 13.69688868 Babesia microti 5868 SAR_Eukaryotes SAR_Eukaryotes 104 1.18e-17   NTclustered gi|1206245954|ref|XR_002459985.1| 1133968 g10991 i0 83.784 17.6503340757238 111 16 24 2 192 301 3504 3613 Babesia microti strain RI 28S ribosomal RNA rRNA blastn 7925 104 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
21607402 21607402 PRJNA763243_P_NODE_39337_length_278_cov_10.526829_g38991_i0 PRJNA763243 39337 278 10.526829 29.26458462 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 58.4 5.5e-4   NTclustered gi|527046684|tpe|HG323586.1| 5833 g38991 i0 100 1.40647482014388 31 0 11 0 181 211 159 189 TPA: Plasmodium falciparum SRP RNA for signal recognition particle RNA blastn 391 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
27315850 27315850 PRJNA763243_P_NODE_48323_length_258_cov_1.064865_g47977_i0 PRJNA763243 48323 258 1.064865 2.7473517 Piroplasmida 5863 SAR_Eukaryotes SAR_Eukaryotes 93.6 1.31e-22   NR XP_012766668.1 5866 g47977 i0 52.4 5.76744186046512 84 40 97.7 0 6 257 18 101 XP_012766668.1 ribosomal protein S25, putative [Babesia bigemina] diamond 1488 93.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
28515644 28515644 PRJNA763243_P_NODE_54647_length_248_cov_3.605714_g54301_i0 PRJNA763243 54647 248 3.605714 8.94217072 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 107 7.22e-26   NR XP_004828633.1 1537102 g54301 i0 61.4 7.88709677419355 83 28 95.6 1 10 246 134 216 XP_004828633.1 60S ribosomal protein L5e, putative [Theileria equi strain WA] diamond 1956 107 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
28537699 28537699 PRJNA763243_P_NODE_38727_length_280_cov_1.826087_g38381_i0 PRJNA763243 38727 280 1.826087 5.1130436 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 58.2 1.7e-7   NR KAF8817676.1 476202 g38381 i0 41.6 0.825 77 43 80.4 1 45 269 80 156 KAF8817676.1 hypothetical protein IE077_004244, partial [Cardiosporidium cionae] diamond 231 58.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
29484417 29484417 PRJNA763243_P_NODE_14550_length_403_cov_2.463636_g14205_i0 PRJNA763243 14550 403 2.463636 9.92845308 Porospora cf. gigantea B 2853592 SAR_Eukaryotes SAR_Eukaryotes 62.8 2.17e-8   NR XP_068375068.1 2853592 g14205 i0 35.6 4.24317617866005 118 69 87.8 4 10 363 400 510 XP_068375068.1 MAG: uncharacterized protein KVP17_004656 [Porospora cf. gigantea B] diamond 1710 62.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Porosporidae Porospora Porospora cf. gigantea B
30189119 30189119 PRJNA763243_P_NODE_35492_length_289_cov_1.763889_g35146_i0 PRJNA763243 35492 289 1.763889 5.09763921 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 87 1.38e-17   NR AAF00541.1 5811 g35146 i0 52.4 4.28719723183391 82 39 85.1 0 4 249 346 427 AAF00541.1 mitochondrial processing peptidase alpha subunit homolog, partial [Toxoplasma gondii] diamond 1239 87.8 0.990888382687927 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
31475374 31475374 PRJNA763243_P_NODE_62536_length_242_cov_0.911243_g62190_i0 PRJNA763243 62536 242 0.911243 2.20520806 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 100 2.18e-24   NR XP_026194393.1 88456 g62190 i0 57.9 15.1115702479339 76 32 94.2 0 236 9 35 110 XP_026194393.1 malignant T-cell-amplified sequence 1 homolog [Cyclospora cayetanensis] diamond 3657 100 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;