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contig_metadata

13 rows where bioproject = "PRJNA763243", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 13 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 13 ✖

bioproject 1

  • PRJNA763243 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12223019 12223019 PRJNA763243_P_NODE_43170_length_269_cov_2.193878_g42824_i0 PRJNA763243 43170 269 2.193878 5.90153182 Plectus minimus 446301 Nematoda Nematoda 457 4.4699999999999985e-124   NTclustered gi|148614851|gb|EF417148.1| 446301 g42824 i0 97.736 97.8252788104089 265 6 99 0 3 267 280 16 Plectus minimus large subunit ribosomal RNA gene, partial sequence blastn 26315 457 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Plectida Plectidae Plectus Plectus minimus
13497653 13497653 PRJNA763243_P_NODE_66431_length_233_cov_5.900000_g66085_i0 PRJNA763243 66431 233 5.9 13.747 Halicephalobus sp. NKZ332 2598192 Nematoda Nematoda 101 2.44e-25   NR KAE9553166.1 2598192 g66085 i0 63.2 0.978540772532189 76 28 97.9 0 228 1 40 115 KAE9553166.1 hypothetical protein FO519_003605 [Halicephalobus sp. NKZ332] diamond 228 101 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Panagrolaimidae Halicephalobus Halicephalobus sp. NKZ332
23697020 23697020 PRJNA763243_P_NODE_7379_length_536_cov_2.531317_g7039_i0 PRJNA763243 7379 536 2.531317 13.56785912 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 197 2.36e-60   NR XP_064070308.1 51031 g7039 i0 60.5 21.3470149253731 172 68 96.3 0 531 16 35 206 XP_064070308.1 hypothetical protein RB195_026050 [Necator americanus] diamond 11442 197 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Necator Necator americanus
24970759 24970759 PRJNA763243_P_NODE_9060_length_493_cov_8.440476_g8718_i0 PRJNA763243 9060 493 8.440476 41.61154668 Caenorhabditis remanei 31234 Nematoda Nematoda 385 4.18e-102   NTclustered gi|2445353178|ref|XM_003097296.2| 31234 g8718 i0 85.912 75.6754563894523 362 49 73 2 121 481 1307 947 Caenorhabditis remanei uncharacterized protein (GCK72_003433), partial mRNA blastn 37308 385 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis remanei
27410734 27410734 PRJNA763243_P_NODE_60563_length_243_cov_2.552941_g60217_i0 PRJNA763243 60563 243 2.552941 6.20364663 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 111 5.7899999999999995e-30   NR KAL1245660.1 6334 g60217 i0 61.5 9.62962962962963 78 30 96.3 0 239 6 7 84 KAL1245660.1 U6 snRNA-associated Sm-like protein [Trichinella spiralis] diamond 2340 111 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
28316526 28316526 PRJNA763243_P_NODE_43346_length_269_cov_1.168367_g43000_i0 PRJNA763243 43346 269 1.168367 3.14290723 Heterodera trifolii 157864 Nematoda Nematoda 57.4 3.1e-7   NR KAL3073343.1 157864 g43000 i0 51.7 0.646840148698885 58 28 64.7 0 268 95 209 266 KAL3073343.1 hypothetical protein niasHT_038700 [Heterodera trifolii] diamond 174 57.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
28515641 28515641 PRJNA763243_P_NODE_33267_length_296_cov_1.739910_g32921_i0 PRJNA763243 33267 296 1.73991 5.1501336 Rhabditida 6236 Nematoda Nematoda 43.9 0.0205   NR TKR81205.1 34508 g32921 i0 56.8 1.85472972972973 37 15 36.5 1 293 186 172 208 TKR81205.1 hypothetical protein L596_015117 [Steinernema carpocapsae] diamond 549 43.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
28663877 28663877 PRJNA763243_P_NODE_59567_length_244_cov_1.368421_g59221_i0 PRJNA763243 59567 244 1.368421 3.33894724 Ditylenchus destructor 166010 Nematoda Nematoda 48.9 1.83e-4   NR KAI1722980.1 166010 g59221 i0 47.2 2.55737704918033 53 23 61.5 2 88 237 163 213 KAI1722980.1 lectin c-type domain-containing protein [Ditylenchus destructor] diamond 624 48.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
29800355 29800355 PRJNA763243_P_NODE_37331_length_284_cov_1.180095_g36985_i0 PRJNA763243 37331 284 1.180095 3.3514698 Bursaphelenchus okinawaensis 465554 Nematoda Nematoda 52.4 2.47e-5   NR CAD5210860.1 465554 g36985 i0 35.6 3.47535211267606 59 32 56 2 112 270 124 182 CAD5210860.1 unnamed protein product [Bursaphelenchus okinawaensis] diamond 987 52.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus okinawaensis
30147711 30147711 PRJNA763243_P_NODE_56692_length_247_cov_0.879310_g56346_i0 PRJNA763243 56692 247 0.87931 2.1718957 Pristionchus fissidentatus 1538716 Nematoda Nematoda 46.2 6.87e-4   NR GMT18625.1 1538716 g56346 i0 34.9 1.0080971659919 83 48 99.6 2 2 247 9 86 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 249 46.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
30874637 30874637 PRJNA763243_P_NODE_59274_length_244_cov_3.064327_g58928_i0 PRJNA763243 59274 244 3.064327 7.47695788 Trichostrongylus colubriformis 6319 Nematoda Nematoda 55.1 3.66e-7   NR KAK5965779.1 6319 g58928 i0 54.8 5.63114754098361 42 19 51.6 0 242 117 87 128 KAK5965779.1 Anticodon binding domain protein [Trichostrongylus colubriformis] diamond 1374 55.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Trichostrongylus Trichostrongylus colubriformis
31507088 31507088 PRJNA763243_P_NODE_24436_length_326_cov_4.521739_g24090_i0 PRJNA763243 24436 326 4.521739 14.74086914 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 47.8 0.00148   NR CAD5226631.1 6326 g24090 i0 50.9 2.43865030674847 53 23 48.8 2 128 286 18 67 CAD5226631.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 795 47.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
32244487 32244487 PRJNA763243_P_NODE_61658_length_242_cov_5.568047_g61312_i0 PRJNA763243 61658 242 5.568047 13.47467374 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.2 0.00208   NR KAK0427080.1 289476 g61312 i0 40 2.20661157024793 65 38 79.3 1 200 9 1 65 KAK0427080.1 hypothetical protein QR680_010051 [Steinernema hermaphroditum] diamond 534 46.6 0.991416309012876 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema hermaphroditum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;