contig_metadata
8 rows where bioproject = "PRJNA763243" and tax_clade = "Metamonada"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10946763 | 10946763 | PRJNA763243_P_NODE_14609_length_402_cov_6.975684_g14264_i0 | PRJNA763243 | 14609 | 402 | 6.975684 | 28.04224968 | Trichomonas vaginalis | 5722 | Parabasalia | other_Eukaryota | 65.8 | 4.95e-6 | NTclustered | gi|2319615616|ref|XR_007835995.1| | 412133 | g14264 | i0 | 90.385 | 1.95522388059702 | 52 | 2 | 13 | 3 | 227 | 277 | 2610 | 2561 | Trichomonas vaginalis G3 23S ribosomal RNA (TVAGG3_0034210), rRNA | blastn | 786 | 65.8 | 1 | Eukaryota | Metamonada | Parabasalia | Trichomonadida | Trichomonadidae | Trichomonas | Trichomonas vaginalis | |||
| 27369577 | 27369577 | PRJNA763243_P_NODE_71303_length_214_cov_5.347518_g70957_i0 | PRJNA763243 | 71303 | 214 | 5.347518 | 11.44368852 | Anaeramoeba flamelloides | 1746091 | Root_unresolved | Root_unresolved | 48.5 | 2.4e-4 | NR | KAJ3449789.1 | 1746091 | g70957 | i0 | 44.1 | 0.827102803738318 | 59 | 33 | 82.7 | 0 | 178 | 2 | 492 | 550 | KAJ3449789.1 alpha-actinin sarcomeric-like protein [Anaeramoeba flamelloides] | diamond | 177 | 48.5 | 1 | Eukaryota | Metamonada | Anaeramoebidae | Anaeramoeba | Anaeramoeba flamelloides | |||||
| 28379604 | 28379604 | PRJNA763243_P_NODE_49566_length_255_cov_2.000000_g49220_i0 | PRJNA763243 | 49566 | 255 | 2 | 5.1 | Anaeramoeba flamelloides | 1746091 | Root_unresolved | Root_unresolved | 52.8 | 1.24e-5 | NR | KAJ3440349.1 | 1746091 | g49220 | i0 | 37.5 | 0.941176470588235 | 80 | 45 | 92.9 | 4 | 6 | 242 | 22 | 97 | KAJ3440349.1 hypothetical protein M0812_16407 [Anaeramoeba flamelloides] | diamond | 240 | 52.8 | 1 | Eukaryota | Metamonada | Anaeramoebidae | Anaeramoeba | Anaeramoeba flamelloides | |||||
| 28505940 | 28505940 | PRJNA763243_P_NODE_66787_length_232_cov_3.855346_g66441_i0 | PRJNA763243 | 66787 | 232 | 3.855346 | 8.94440272 | Kipferlia bialata | 797122 | Fornicata | other_Eukaryota | 53.5 | 5.08e-6 | NR | GIQ80339.1 | 797122 | g66441 | i0 | 52.1 | 0.620689655172414 | 48 | 23 | 62.1 | 0 | 15 | 158 | 2886 | 2933 | GIQ80339.1 hypothetical protein KIPB_001119, partial [Kipferlia bialata] | diamond | 144 | 53.5 | 1 | Eukaryota | Metamonada | Fornicata | Kipferlia | Kipferlia bialata | |||||
| 28537706 | 28537706 | PRJNA763243_P_NODE_47687_length_259_cov_1.655914_g47341_i0 | PRJNA763243 | 47687 | 259 | 1.655914 | 4.28881726 | Anaeramoeba flamelloides | 1746091 | Root_unresolved | Root_unresolved | 110 | 4.23e-26 | NR | KAJ3424487.1 | 1746091 | g47341 | i0 | 61.8 | 5.28185328185328 | 76 | 29 | 88 | 0 | 22 | 249 | 22 | 97 | KAJ3424487.1 adp-ribosylation factor gtpase-activating protein [Anaeramoeba flamelloides] | diamond | 1368 | 110 | 1 | Eukaryota | Metamonada | Anaeramoebidae | Anaeramoeba | Anaeramoeba flamelloides | |||||
| 29642281 | 29642281 | PRJNA763243_P_NODE_54150_length_249_cov_0.875000_g53804_i0 | PRJNA763243 | 54150 | 249 | 0.875 | 2.17875 | Anaeramoeba flamelloides | 1746091 | Root_unresolved | Root_unresolved | 122 | 3.3799999999999995e-31 | NR | KAJ3427686.1 | 1746091 | g53804 | i0 | 69.6 | 3.87951807228916 | 79 | 24 | 95.2 | 0 | 243 | 7 | 105 | 183 | KAJ3427686.1 ribosomal protein L5-RELATED [Anaeramoeba flamelloides] | diamond | 966 | 122 | 1 | Eukaryota | Metamonada | Anaeramoebidae | Anaeramoeba | Anaeramoeba flamelloides | |||||
| 30306426 | 30306426 | PRJNA763243_P_NODE_57492_length_246_cov_0.890173_g57146_i0 | PRJNA763243 | 57492 | 246 | 0.890173 | 2.18982558 | Paratrimastix pyriformis | 342808 | Preaxostyla | other_Eukaryota | 58.5 | 1.05e-7 | NR | KAJ4454715.1 | 342808 | g57146 | i0 | 51.9 | 0.658536585365854 | 54 | 26 | 65.9 | 0 | 245 | 84 | 188 | 241 | KAJ4454715.1 putative protein kinase [Paratrimastix pyriformis] | diamond | 162 | 58.5 | 1 | Eukaryota | Metamonada | Preaxostyla | Paratrimastigidae | Paratrimastix | Paratrimastix pyriformis | ||||
| 32519497 | 32519497 | PRJNA763243_P_NODE_19419_length_358_cov_1.052632_g19074_i0 | PRJNA763243 | 19419 | 358 | 1.052632 | 3.76842256 | Anaeramoeba ignava | 1746090 | Root_unresolved | Root_unresolved | 76.6 | 1.8e-13 | NR | KAJ5079322.1 | 1746090 | g19074 | i0 | 39.7 | 0.972067039106145 | 116 | 68 | 97.2 | 2 | 351 | 4 | 374 | 487 | KAJ5079322.1 importin subunit alpha-4 [Anaeramoeba ignava] | diamond | 348 | 76.6 | 1 | Eukaryota | Metamonada | Anaeramoebidae | Anaeramoeba | Anaeramoeba ignava |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;