RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA763243", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Schekmaniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Schekmaniibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA763243 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28673498 28673498 PRJNA763243_P_NODE_37987_length_282_cov_1.444976_g37641_i0 PRJNA763243 37987 282 1.444976 4.07483232 Bacillati 1783272 Bacteria Bacteria 47.4 5.53e-4   NR MBI5788682.1 2419984 g37641 i0 31.3 1.90425531914894 64 43 68.1 1 244 53 11 73 MBI5788682.1 cyclic nucleotide-binding domain-containing protein [Candidatus Schekmanbacteria bacterium] diamond 537 47.8 0.99163179916318 Bacteria Bacteria candidate phyla   Candidatus Schekmaniibacteriota         Candidatus Schekmanbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;