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contig_metadata

31 rows where bioproject = "PRJNA760976" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 31 ✖

tax_clade 1

bioproject 1

  • PRJNA760976 · 31 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5845977 5845977 PRJNA760976_P_NODE_50345_length_247_cov_0.885057_g50024_i0 PRJNA760976 50345 247 0.885057 2.18609079 archaeon 1906665 Archaea Archaea 91.3 1.95e-21   NR MDP2439833.1 1906665 g50024 i0 46.8 0.959514170040486 79 42 96 0 239 3 13 91 MDP2439833.1 thioredoxin domain-containing protein [archaeon] diamond 237 91.3 1 Archaea               archaeon
12221936 12221936 PRJNA760976_P_NODE_11310_length_429_cov_3.258427_g10990_i0 PRJNA760976 11310 429 3.258427 13.97865183 archaeon 1906665 Archaea Archaea 122 4.53e-33   NR MDP2439821.1 1906665 g10990 i0 65.5 0.811188811188811 116 37 79 1 413 75 1 116 MDP2439821.1 eS25 family ribosomal protein [archaeon] diamond 348 122 1 Archaea               archaeon
12221973 12221973 PRJNA760976_P_NODE_21210_length_342_cov_1.137546_g20889_i0 PRJNA760976 21210 342 1.137546 3.89040732 archaeon 1906665 Archaea Archaea 123 3.01e-33   NR MDP2438822.1 1906665 g20889 i0 84.9 0.640350877192982 73 11 64 0 221 3 1 73 MDP2438822.1 50S ribosomal protein L11 [archaeon] diamond 219 123 1 Archaea               archaeon
12222086 12222086 PRJNA760976_P_NODE_8850_length_471_cov_1.537688_g8531_i0 PRJNA760976 8850 471 1.537688 7.24251048 archaeon 1906665 Archaea Archaea 214 2.68e-68   NR MDP2434214.1 1906665 g8531 i0 79.7 0.942675159235669 148 30 94.3 0 7 450 1 148 MDP2434214.1 50S ribosomal protein L19e [archaeon] diamond 444 214 1 Archaea               archaeon
14771310 14771310 PRJNA760976_P_NODE_47092_length_253_cov_1.266667_g46771_i0 PRJNA760976 47092 253 1.266667 3.20466751 archaeon 1906665 Archaea Archaea 155 2.6299999999999997e-45   NR MDP2435760.1 1906665 g46771 i0 90.4 0.984189723320158 83 8 98.4 0 249 1 117 199 MDP2435760.1 30S ribosomal protein S3 [archaeon] diamond 249 155 1 Archaea               archaeon
16507877 16507877 PRJNA760976_P_NODE_15093_length_385_cov_1.900641_g14772_i0 PRJNA760976 15093 385 1.900641 7.31746785 archaeon 1906665 Archaea Archaea 189 4.95e-57   NR MDP2437415.1 1906665 g14772 i0 71.4 4.87792207792208 126 36 98.2 0 7 384 1 126 MDP2437415.1 hypothetical protein [archaeon] diamond 1878 189 1 Archaea               archaeon
18593990 18593990 PRJNA760976_P_NODE_13355_length_402_cov_1.167173_g13035_i0 PRJNA760976 13355 402 1.167173 4.69203546 archaeon 1906665 Archaea Archaea 231 8.48e-76   NR MDP2435192.1 1906665 g13035 i0 95.9 0.902985074626866 121 4 90.3 1 363 1 1 120 MDP2435192.1 F-actin-capping protein subunit beta [archaeon] diamond 363 231 1 Archaea               archaeon
19869242 19869242 PRJNA760976_P_NODE_27016_length_314_cov_1.307054_g26695_i0 PRJNA760976 27016 314 1.307054 4.10414956 archaeon 1906665 Archaea Archaea 160 4.419999999999999e-47   NR MDP2436279.1 1906665 g26695 i0 82.3 0.917197452229299 96 17 91.7 0 289 2 1 96 MDP2436279.1 hypothetical protein [archaeon] diamond 288 160 1 Archaea               archaeon
27021520 27021520 PRJNA760976_P_NODE_15422_length_382_cov_1.453074_g15101_i0 PRJNA760976 15422 382 1.453074 5.55074268 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 57 1.8e-6   NR MFH0986869.1 2250274 g15101 i0 37.9 0.683246073298429 87 45 62.8 2 358 119 193 277 MFH0986869.1 hypothetical protein [Candidatus Micrarchaeota archaeon] diamond 261 57 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
27653557 27653557 PRJNA760976_P_NODE_46524_length_254_cov_1.668508_g46203_i0 PRJNA760976 46524 254 1.668508 4.23801032 archaeon 1906665 Archaea Archaea 99.8 3.1999999999999997e-25   NR MDP2438881.1 1906665 g46203 i0 55.6 0.956692913385827 81 35 95.7 1 6 248 1 80 MDP2438881.1 hypothetical protein [archaeon] diamond 243 99.8 1 Archaea               archaeon
27779812 27779812 PRJNA760976_P_NODE_55124_length_242_cov_0.911243_g54803_i0 PRJNA760976 55124 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 102 1.5899999999999999e-24   NR MDP2439172.1 1906665 g54803 i0 65.7 0.867768595041322 70 24 86.8 0 241 32 206 275 MDP2439172.1 S1 RNA-binding domain-containing protein [archaeon] diamond 210 102 1 Archaea               archaeon
28262799 28262799 PRJNA760976_P_NODE_51966_length_245_cov_0.895349_g51645_i0 PRJNA760976 51966 245 0.895349 2.19360505 Methanothrix 2222 Archaea Archaea 48.9 2.58e-4   NR WP_157863671.1 2223 g51645 i0 45.3 6.26938775510204 64 30 77.1 3 202 14 8 67 WP_157863671.1 trypsin-like serine protease [Methanothrix soehngenii] diamond 1536 48.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix soehngenii
28316495 28316495 PRJNA760976_P_NODE_48526_length_250_cov_0.870056_g48205_i0 PRJNA760976 48526 250 0.870056 2.17514 archaeon 1906665 Archaea Archaea 99 6.86e-22   NR MDP2435499.1 1906665 g48205 i0 58.5 0.984 82 34 98.4 0 4 249 612 693 MDP2435499.1 hypothetical protein [archaeon] diamond 246 99 1 Archaea               archaeon
28474344 28474344 PRJNA760976_P_NODE_48066_length_251_cov_0.865169_g47745_i0 PRJNA760976 48066 251 0.865169 2.17157419 archaeon 1906665 Archaea Archaea 124 7.6399999999999995e-34   NR MDP2434989.1 1906665 g47745 i0 87.2 0.932270916334661 78 10 93.2 0 238 5 114 191 MDP2434989.1 ankyrin repeat domain-containing protein [archaeon] diamond 234 124 1 Archaea               archaeon
28505882 28505882 PRJNA760976_P_NODE_48627_length_250_cov_0.870056_g48306_i0 PRJNA760976 48627 250 0.870056 2.17514 archaeon 1906665 Archaea Archaea 86.7 8.85e-20   NR MDP2438202.1 1906665 g48306 i0 47.1 1.02 85 43 99.6 1 2 250 24 108 MDP2438202.1 hypothetical protein [archaeon] diamond 255 86.7 1 Archaea               archaeon
28505883 28505883 PRJNA760976_P_NODE_51467_length_246_cov_0.861272_g51146_i0 PRJNA760976 51467 246 0.861272 2.11872912 archaeon 1906665 Archaea Archaea 75.9 1.31e-15   NR MDP2438964.1 1906665 g51146 i0 52.7 0.902439024390244 74 31 85.4 1 237 28 27 100 MDP2438964.1 hypothetical protein [archaeon] diamond 222 75.9 1 Archaea               archaeon
28663819 28663819 PRJNA760976_P_NODE_22747_length_333_cov_1.750000_g22426_i0 PRJNA760976 22747 333 1.75 5.8275 archaeon 1906665 Archaea Archaea 121 2.95e-29   NR MDP2439127.1 1906665 g22426 i0 71.4 0.81981981981982 91 25 81.1 1 270 1 2 92 MDP2439127.1 molecular chaperone HtpG [archaeon] diamond 273 121 1 Archaea               archaeon
28821317 28821317 PRJNA760976_P_NODE_48608_length_250_cov_0.870056_g48287_i0 PRJNA760976 48608 250 0.870056 2.17514 archaeon 1906665 Archaea Archaea 99.8 3.25e-24   NR MDP2436035.1 1906665 g48287 i0 58.7 0.9 75 31 90 0 227 3 12 86 MDP2436035.1 peroxiredoxin [archaeon] diamond 225 99.8 1 Archaea               archaeon
28852969 28852969 PRJNA760976_P_NODE_41648_length_267_cov_1.231959_g41327_i0 PRJNA760976 41648 267 1.231959 3.28933053 archaeon 1906665 Archaea Archaea 72.8 1.19e-12   NR MDP2434733.1 1906665 g41327 i0 83.7 0.48314606741573 43 7 48.3 0 2 130 358 400 MDP2434733.1 60S ribosomal protein L3 [archaeon] diamond 129 72.8 1 Archaea               archaeon
28916094 28916094 PRJNA760976_P_NODE_29148_length_305_cov_2.849138_g28827_i0 PRJNA760976 29148 305 2.849138 8.6898709 archaeon 1906665 Archaea Archaea 144 6.53e-42   NR MDP2438488.1 1906665 g28827 i0 70.2 0.924590163934426 94 28 92.5 0 282 1 1 94 MDP2438488.1 KOW motif-containing protein [archaeon] diamond 282 144 1 Archaea               archaeon
29137623 29137623 PRJNA760976_P_NODE_3509_length_696_cov_2.268058_g3206_i0 PRJNA760976 3509 696 2.268058 15.78568368 Thermoplasmatota archaeon 2806419 Archaea Archaea 121 4.44e-30   NR HWG91149.1 2806419 g3206 i0 32.6 0.741379310344828 172 116 74.1 0 582 67 6 177 HWG91149.1 hypothetical protein [Thermoplasmatota archaeon] diamond 516 121 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29989978 29989978 PRJNA760976_P_NODE_56011_length_241_cov_1.375000_g55690_i0 PRJNA760976 56011 241 1.375 3.31375 archaeon 1906665 Archaea Archaea 96.7 5.2e-22   NR MDP2437415.1 1906665 g55690 i0 59.5 0.983402489626556 79 30 98.3 1 239 3 204 280 MDP2437415.1 hypothetical protein [archaeon] diamond 237 96.7 1 Archaea               archaeon
30495601 30495601 PRJNA760976_P_NODE_33153_length_292_cov_0.817352_g32832_i0 PRJNA760976 33153 292 0.817352 2.38666784 Promethearchaeota archaeon 2053489 Archaea Archaea 88.6 4.03e-18   NR TXT59832.1 2053489 g32832 i0 47.9 0.965753424657534 94 45 96.6 2 290 9 356 445 TXT59832.1 MAG: Cyclic 2,3-diphosphoglycerate synthetase [Promethearchaeota archaeon] diamond 282 88.6 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
30811406 30811406 PRJNA760976_P_NODE_6714_length_524_cov_0.895787_g6396_i0 PRJNA760976 6714 524 0.895787 4.69392388 archaeon 1906665 Archaea Archaea 264 1.7e-86   NR MDP2437012.1 1906665 g6396 i0 78.9 0.950381679389313 166 35 95 0 25 522 1 166 MDP2437012.1 S6e family ribosomal protein [archaeon] diamond 498 264 1 Archaea               archaeon
30937947 30937947 PRJNA760976_P_NODE_55114_length_242_cov_0.911243_g54793_i0 PRJNA760976 55114 242 0.911243 2.20520806 archaeon 1906665 Archaea Archaea 73.2 3.58e-13   NR MDP2435090.1 1906665 g54793 i0 40.7 1.00413223140496 81 47 99.2 1 241 2 78 158 MDP2435090.1 elongation of very long chain fatty acids protein [archaeon] diamond 243 73.2 1 Archaea               archaeon
31601891 31601891 PRJNA760976_P_NODE_28516_length_308_cov_1.276596_g28195_i0 PRJNA760976 28516 308 1.276596 3.93191568 archaeon 1906665 Archaea Archaea 56.2 1.11e-6   NR MDP2434431.1 1906665 g28195 i0 57.9 0.555194805194805 57 19 53.6 2 120 284 226 279 MDP2434431.1 hypothetical protein [archaeon] diamond 171 56.2 1 Archaea               archaeon
31822983 31822983 PRJNA760976_P_NODE_14997_length_386_cov_1.476038_g14676_i0 PRJNA760976 14997 386 1.476038 5.69750668 archaeon 1906665 Archaea Archaea 152 2.2299999999999993e-42   NR MDP2438433.1 1906665 g14676 i0 64.7 0.924870466321243 119 41 92.5 1 364 8 1 118 MDP2438433.1 guanylate kinase [archaeon] diamond 357 152 1 Archaea               archaeon
32139608 32139608 PRJNA760976_P_NODE_48598_length_250_cov_0.870056_g48277_i0 PRJNA760976 48598 250 0.870056 2.17514 archaeon 1906665 Archaea Archaea 87.4 7.58e-18   NR MDP2434858.1 1906665 g48277 i0 73.3 0.72 60 16 72 0 1 180 514 573 MDP2434858.1 AAA family ATPase [archaeon] diamond 180 87.4 1 Archaea               archaeon
32424337 32424337 PRJNA760976_P_NODE_48559_length_250_cov_0.870056_g48238_i0 PRJNA760976 48559 250 0.870056 2.17514 archaeon 1906665 Archaea Archaea 100 4.7199999999999996e-23   NR MDP2439270.1 1906665 g48238 i0 60.2 0.996 83 33 99.6 0 250 2 268 350 MDP2439270.1 replication factor C small subunit [archaeon] diamond 249 100 1 Archaea               archaeon
32551174 32551174 PRJNA760976_P_NODE_51559_length_245_cov_2.238372_g51238_i0 PRJNA760976 51559 245 2.238372 5.4840114 archaeon 1906665 Archaea Archaea 98.6 7.949999999999999e-23   NR MDP2435546.1 1906665 g51238 i0 67.2 0.783673469387755 64 21 78.4 0 52 243 1 64 MDP2435546.1 30S ribosomal protein S2 [archaeon] diamond 192 98.6 1 Archaea               archaeon
32582602 32582602 PRJNA760976_P_NODE_16059_length_377_cov_1.368421_g15738_i0 PRJNA760976 16059 377 1.368421 5.15894717 archaeon 1906665 Archaea Archaea 149 1.3399999999999996e-43   NR MDP2436531.1 1906665 g15738 i0 62.9 0.923076923076923 116 42 92.3 1 356 9 1 115 MDP2436531.1 translation initiation factor IF-5A [archaeon] diamond 348 149 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;