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contig_metadata

21 rows where bioproject = "PRJNA760976", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 21 ✖

tax_phylum 1

  • Myxococcota · 21 ✖

tax_kingdom 1

bioproject 1

  • PRJNA760976 · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14771312 14771312 PRJNA760976_P_NODE_48012_length_251_cov_0.915730_g47691_i0 PRJNA760976 48012 251 0.91573 2.2984823 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 154 8.38e-42   NR MBI2485459.1 2026735 g47691 i0 79.5 15.8725099601594 83 17 99.2 0 250 2 362 444 MBI2485459.1 phosphoenolpyruvate carboxykinase (GTP) [Deltaproteobacteria bacterium] diamond 3984 154 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
22419648 22419648 PRJNA760976_P_NODE_28938_length_306_cov_1.888412_g28617_i0 PRJNA760976 28938 306 1.888412 5.77854072 Pendulispora brunnea 2905690 Bacteria Bacteria 302 2.5700000000000002e-77   NTclustered gi|2698055994|gb|CP089982.1| 2905690 g28617 i0 84.641 353.59477124183 306 44 99 3 3 306 9037910 9038214 Pendulispora brunnea strain MSr12523 chromosome, complete genome blastn 108200 302 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Pendulisporaceae Pendulispora Pendulispora brunnea
26745909 26745909 PRJNA760976_P_NODE_32781_length_293_cov_1.045455_g32460_i0 PRJNA760976 32781 293 1.045455 3.06318315 Bacteria 2 Bacteria Bacteria 122 5.21e-30   NR TMB15647.1 2026735 g32460 i0 62.4 6.64505119453925 93 33 95.2 2 286 8 968 1058 TMB15647.1 MAG: hypothetical protein E6J71_18480, partial [Deltaproteobacteria bacterium] diamond 1947 122 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
26989623 26989623 PRJNA760976_P_NODE_56322_length_241_cov_0.904762_g56001_i0 PRJNA760976 56322 241 0.904762 2.18047642 Myxococcota bacterium 2818507 Bacteria Bacteria 79 4.24e-15   NR MEW5742578.1 2818507 g56001 i0 44.6 2.83817427385892 74 41 92.1 0 222 1 147 220 MEW5742578.1 PHB depolymerase family esterase [Myxococcota bacterium] diamond 684 79 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
27189091 27189091 PRJNA760976_P_NODE_47642_length_251_cov_2.471910_g47321_i0 PRJNA760976 47642 251 2.47191 6.2044941 Bacteria 2 Bacteria Bacteria 68.2 3.52e-11   NR MBA3542242.1 2026735 g47321 i0 41.3 1.47011952191235 63 35 72.9 1 195 13 29 91 MBA3542242.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 369 68.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27210964 27210964 PRJNA760976_P_NODE_30482_length_301_cov_0.934211_g30161_i0 PRJNA760976 30482 301 0.934211 2.81197511 Myxococcales bacterium 2026763 Bacteria Bacteria 60.1 5.96e-8   NR MBR56859.1 2026763 g30161 i0 42.4 0.847176079734219 85 32 69.8 4 210 1 227 309 MBR56859.1 hypothetical protein [Myxococcales bacterium] diamond 255 60.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27495592 27495592 PRJNA760976_P_NODE_53943_length_243_cov_0.905882_g53622_i0 PRJNA760976 53943 243 0.905882 2.20129326 Nannocystis bainbridge 2995303 Bacteria Bacteria 47.8 1.55e-4   NR WP_272092255.1 2995303 g53622 i0 39.1 2.34567901234568 64 33 76.5 2 1 186 62 121 WP_272092255.1 beta/gamma crystallin-related protein [Nannocystis bainbridge] diamond 570 47.8 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis bainbridge
27536819 27536819 PRJNA760976_P_NODE_16743_length_371_cov_1.530201_g16422_i0 PRJNA760976 16743 371 1.530201 5.67704571 Pseudomonadati 3379134 Bacteria Bacteria 121 2.21e-31   NR MBW2463484.1 2026735 g16422 i0 54.6 2.58760107816712 108 47 87.3 1 48 371 98 203 MBW2463484.1 HD domain-containing protein [Deltaproteobacteria bacterium] diamond 960 121 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28253214 28253214 PRJNA760976_P_NODE_55566_length_242_cov_0.869822_g55245_i0 PRJNA760976 55566 242 0.869822 2.10496924 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 40.8 0.0481   NR MDP3040544.1 2026735 g55245 i0 45.5 0.545454545454545 44 24 54.5 0 49 180 20 63 MDP3040544.1 HU family DNA-binding protein [Deltaproteobacteria bacterium] diamond 132 40.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28474340 28474340 PRJNA760976_P_NODE_25366_length_321_cov_1.241935_g25045_i0 PRJNA760976 25366 321 1.241935 3.98661135 Myxococcales bacterium 2026763 Bacteria Bacteria 57.4 6.33e-7   NR MDD9968233.1 2026763 g25045 i0 32.7 0.91588785046729 98 46 74.8 3 17 256 255 350 MDD9968233.1 hypothetical protein [Myxococcales bacterium] diamond 294 57.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28821318 28821318 PRJNA760976_P_NODE_50388_length_247_cov_0.885057_g50067_i0 PRJNA760976 50388 247 0.885057 2.18609079 Polyangiales bacterium 3034171 Bacteria Bacteria 58.9 7.28e-8   NR MFO0557563.1 3034171 g50067 i0 55.8 0.631578947368421 52 20 59.5 1 2 148 266 317 MFO0557563.1 hypothetical protein [Polyangiales bacterium] diamond 156 58.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
28831200 28831200 PRJNA760976_P_NODE_7248_length_508_cov_1.494253_g6930_i0 PRJNA760976 7248 508 1.494253 7.59080524 Myxococcia 32015 Bacteria Bacteria 71.2 6.64e-11   NR HXK18886.1 2268199 g6930 i0 36.8 5.40944881889764 144 70 75 7 382 2 205 344 HXK18886.1 hypothetical protein [Polyangiaceae bacterium] diamond 2748 71.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29084003 29084003 PRJNA760976_P_NODE_49188_length_249_cov_0.875000_g48867_i0 PRJNA760976 49188 249 0.875 2.17875 Pseudomonadati 3379134 Bacteria Bacteria 97.4 1.4500000000000002e-21   NR MBL9103692.1 2026763 g48867 i0 54.9 6.91566265060241 82 37 98.8 0 3 248 197 278 MBL9103692.1 ATP-binding protein [Myxococcales bacterium] diamond 1722 97.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29579139 29579139 PRJNA760976_P_NODE_6810_length_521_cov_2.100446_g6492_i0 PRJNA760976 6810 521 2.100446 10.94332366 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 47 0.0194   NR MBM4370521.1 2026735 g6492 i0 43.9 0.662188099808061 57 29 31.1 1 306 467 1847 1903 MBM4370521.1 proprotein convertase P-domain-containing protein [Deltaproteobacteria bacterium] diamond 345 47 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29642242 29642242 PRJNA760976_P_NODE_18990_length_355_cov_1.329787_g18669_i0 PRJNA760976 18990 355 1.329787 4.72074385 Myxococcales bacterium 2026763 Bacteria Bacteria 54.7 8.57e-6   NR MBR56859.1 2026763 g18669 i0 35.3 2.72112676056338 85 43 71.8 3 337 83 238 310 MBR56859.1 hypothetical protein [Myxococcales bacterium] diamond 966 54.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29778436 29778436 PRJNA760976_P_NODE_16931_length_370_cov_1.037037_g16610_i0 PRJNA760976 16931 370 1.037037 3.8370369 Myxococcia 32015 Bacteria Bacteria 47 0.00507   NR MCA9609235.1 2026763 g16610 i0 28.3 1.84054054054054 113 79 90.8 2 22 357 269 380 MCA9609235.1 hypothetical protein [Myxococcales bacterium] diamond 681 47 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30937949 30937949 PRJNA760976_P_NODE_9534_length_458_cov_1.171429_g9215_i0 PRJNA760976 9534 458 1.171429 5.36514482 Nannocystaceae bacterium 2545255 Bacteria Bacteria 95.1 1.72e-19   NR MEZ4384866.1 2545255 g9215 i0 34.8 0.923580786026201 141 87 89.1 3 23 430 221 361 MEZ4384866.1 carotenoid oxygenase family protein [Nannocystaceae bacterium] diamond 423 95.1 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae   Nannocystaceae bacterium
31317055 31317055 PRJNA760976_P_NODE_31035_length_299_cov_0.991150_g30714_i0 PRJNA760976 31035 299 0.99115 2.9635385 Sorangium cellulosum 56 Bacteria Bacteria 48.9 4.82e-4   NR WP_157906402.1 56 g30714 i0 46.3 0.54180602006689 54 28 53.2 1 116 274 125 178 WP_157906402.1 right-handed parallel beta-helix repeat-containing protein [Sorangium cellulosum] diamond 162 48.9 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
31664857 31664857 PRJNA760976_P_NODE_21977_length_338_cov_0.871698_g21656_i0 PRJNA760976 21977 338 0.871698 2.94633924 Myxococcota bacterium 2818507 Bacteria Bacteria 54.7 7.34e-6   NR MEM6295469.1 2818507 g21656 i0 29.5 3.70118343195266 88 59 75.4 1 79 333 601 688 MEM6295469.1 serine/threonine-protein kinase [Myxococcota bacterium] diamond 1251 54.7 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
32276023 32276023 PRJNA760976_P_NODE_11678_length_424_cov_1.433048_g11358_i0 PRJNA760976 11678 424 1.433048 6.07612352 Pseudomonadati 3379134 Bacteria Bacteria 53.1 4.94e-5   NR MCB9644768.1 2026763 g11358 i0 47.1 1.69811320754717 51 26 36.1 1 11 163 113 162 MCB9644768.1 hypothetical protein [Myxococcales bacterium] diamond 720 53.5 0.992523364485981 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32456141 32456141 PRJNA760976_P_NODE_18679_length_357_cov_1.408451_g18358_i0 PRJNA760976 18679 357 1.408451 5.02817007 Chondromyces crocatus 52 Bacteria Bacteria 136 4.06e-35   NR WP_050432504.1 52 g18358 i0 59 0.983193277310924 117 44 98.3 1 355 5 9 121 WP_050432504.1 NAD(P)/FAD-dependent oxidoreductase [Chondromyces crocatus] diamond 351 136 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces crocatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;