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contig_metadata

8 rows where bioproject = "PRJNA760976", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 8 ✖

tax_phylum 1

  • Bdellovibrionota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA760976 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
742415 742415 PRJNA760976_P_NODE_49101_length_249_cov_0.875000_g48780_i0 PRJNA760976 49101 249 0.875 2.17875 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 135 1.1699999999999999e-34   NR MAV91622.1 2026715 g48780 i0 80.5 1.96385542168675 82 16 98.8 0 246 1 340 421 MAV91622.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] diamond 489 135 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
7121154 7121154 PRJNA760976_P_NODE_48486_length_250_cov_1.152542_g48165_i0 PRJNA760976 48486 250 1.152542 2.881355 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 136 3.47e-36   NR MCB0368368.1 2053517 g48165 i0 80.7 0.996 83 16 99.6 0 1 249 132 214 MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] diamond 249 136 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27410724 27410724 PRJNA760976_P_NODE_52643_length_244_cov_1.350877_g52322_i0 PRJNA760976 52643 244 1.350877 3.29613988 Bacteria 2 Bacteria Bacteria 45.1 0.00581   NR WP_325139870.1 1971216 g52322 i0 38.7 4.77049180327869 75 38 92.2 2 10 234 443 509 WP_325139870.1 fasciclin domain-containing protein [Oligoflexus sp.] diamond 1164 45.1 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.
27852420 27852420 PRJNA760976_P_NODE_28744_length_307_cov_1.294872_g28423_i0 PRJNA760976 28744 307 1.294872 3.97525704 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 59.3 1.64e-8   NR WP_324960231.1 1971216 g28423 i0 45 2.29641693811075 60 33 58.6 0 124 303 1 60 WP_324960231.1 fasciclin domain-containing protein [Oligoflexus sp.] diamond 705 59.7 0.993299832495812 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.
28032394 28032394 PRJNA760976_P_NODE_29925_length_303_cov_0.947826_g29604_i0 PRJNA760976 29925 303 0.947826 2.87191278 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 54.3 6.11e-7   NR MCB0368407.1 2053517 g29604 i0 54 0.495049504950495 50 23 49.5 0 153 4 2 51 MCB0368407.1 hypothetical protein [Bdellovibrionales bacterium] diamond 150 54.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28379561 28379561 PRJNA760976_P_NODE_43966_length_261_cov_1.218085_g43645_i0 PRJNA760976 43966 261 1.218085 3.17920185 Oligoflexales bacterium 2687297 Bacteria Bacteria 118 1.37e-28   NR NRA44133.1 2687297 g43645 i0 66.7 2 87 29 100 0 1 261 332 418 NRA44133.1 dihydrofolate reductase [Oligoflexales bacterium] diamond 522 118 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales     Oligoflexales bacterium
29800324 29800324 PRJNA760976_P_NODE_54931_length_242_cov_1.319527_g54610_i0 PRJNA760976 54931 242 1.319527 3.19325534 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 117 8.35e-31   NR MFN8790765.1 2053517 g54610 i0 61.3 3.95454545454545 80 31 99.2 0 2 241 41 120 MFN8790765.1 lipocalin family protein [Bdellovibrionales bacterium] diamond 957 117 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31601889 31601889 PRJNA760976_P_NODE_14356_length_392_cov_1.404389_g14036_i0 PRJNA760976 14356 392 1.404389 5.50520488 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 211 2.3899999999999997e-67   NR MBP9675022.1 2081706 g14036 i0 81.7 0.964285714285714 126 22 95.7 1 5 379 1 126 MBP9675022.1 EF-hand domain-containing protein [Bacteriovoracaceae bacterium] diamond 378 211 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;