RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA760976", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA760976 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2018451 2018451 PRJNA760976_P_NODE_54042_length_243_cov_0.894118_g53721_i0 PRJNA760976 54042 243 0.894118 2.17270674 Diadema antillarum 105358 Echinodermata other_Eukaryota 165 2.6999999999999997e-36   NTclustered gi|2919377427|ref|XM_071627260.1| 105358 g53721 i0 80.083 37.7654320987654 241 33 99 6 3 243 1452 1227 PREDICTED: Diadema antillarum V-type proton ATPase subunit B (LOC139715708), mRNA blastn 9177 165 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
3756748 3756748 PRJNA760976_P_NODE_22183_length_336_cov_2.003802_g21862_i0 PRJNA760976 22183 336 2.003802 6.73277472 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 110 1.55e-28   NR P13732.1 7673 g21862 i0 56.3 29.9553571428571 103 44 91.1 1 29 334 11 113 P13732.1 RecName: Full=Large ribosomal subunit protein eL22; AltName: Full=60S ribosomal protein L22; AltName: Full=Development-specific protein 217 [Tripneustes gratilla] diamond 10065 110 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Tripneustes Tripneustes gratilla
8395579 8395579 PRJNA760976_P_NODE_13167_length_404_cov_1.371601_g12847_i0 PRJNA760976 13167 404 1.371601 5.54126804 Diadema antillarum 105358 Echinodermata other_Eukaryota 107 1.9099999999999994e-24   NR XP_071480357.1 105358 g12847 i0 38.9 3.1039603960396 144 77 98.8 2 399 1 233 376 XP_071480357.1 thioredoxin domain-containing protein 5-like [Diadema antillarum] diamond 1254 107 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
29210335 29210335 PRJNA760976_P_NODE_50649_length_247_cov_0.862069_g50328_i0 PRJNA760976 50649 247 0.862069 2.12931043 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 53.1 8.78e-6   NR XP_030833803.1 7668 g50328 i0 34.1 6.97165991902834 82 50 99.6 3 1 246 1353 1430 XP_030833803.1 DNA polymerase epsilon catalytic subunit A isoform X1 [Strongylocentrotus purpuratus] diamond 1722 53.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
32085900 32085900 PRJNA760976_P_NODE_10918_length_435_cov_0.814917_g10599_i0 PRJNA760976 10918 435 0.814917 3.54488895 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 146 8.71e-40   NR XP_041475206.1 7654 g10599 i0 55.2 5.91724137931034 143 57 97.9 3 433 8 180 316 XP_041475206.1 UDP-N-acetylglucosamine transporter-like isoform X2 [Lytechinus variegatus] diamond 2574 146 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
32234779 32234779 PRJNA760976_P_NODE_53838_length_243_cov_1.294118_g53517_i0 PRJNA760976 53838 243 1.294118 3.14470674 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 113 7.81e-30   NR XP_041463361.1 7654 g53517 i0 68.5 1.80246913580247 73 23 90.1 0 24 242 1 73 XP_041463361.1 60S ribosomal protein L24-like [Lytechinus variegatus] diamond 438 113 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
32329716 32329716 PRJNA760976_P_NODE_3779_length_672_cov_2.584307_g3474_i0 PRJNA760976 3779 672 2.584307 17.36654304 Patiria miniata 46514 Echinodermata other_Eukaryota 64.7 4.27e-9   NR XP_038066255.1 46514 g3474 i0 31.6 2.57589285714286 136 66 58.9 7 157 552 46 158 XP_038066255.1 alpha-N-acetylgalactosamine-specific lectin-like [Patiria miniata] diamond 1731 64.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;