RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA760976", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA760976 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30748267 30748267 PRJNA760976_P_NODE_12934_length_407_cov_1.502994_g12614_i0 PRJNA760976 12934 407 1.502994 6.11718558 Chthonomonas sp. 2282153 Bacteria Bacteria 62 3.41e-8   NR MBL8041002.1 2282153 g12614 i0 67.4 0.316953316953317 43 13 31.7 1 378 250 256 297 MBL8041002.1 matrilysin family metalloendoprotease [Chthonomonas sp.] diamond 129 62 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas sp.
31411999 31411999 PRJNA760976_P_NODE_44696_length_259_cov_1.392473_g44375_i0 PRJNA760976 44696 259 1.392473 3.60650507 Chthonomonadales bacterium 2282151 Bacteria Bacteria 94 4.44e-20   NR MEP6755950.1 2282151 g44375 i0 57.7 1.76061776061776 71 30 82.2 0 213 1 584 654 MEP6755950.1 beta-galactosidase GalA [Chthonomonadales bacterium] diamond 456 94 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;