RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA760976", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA760976 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21144944 21144944 PRJNA760976_P_NODE_39257_length_273_cov_2.255000_g38936_i0 PRJNA760976 39257 273 2.255 6.15615 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 99.4 4.78e-24   NR ETO32102.1 46433 g38936 i0 51.1 1.97802197802198 90 44 98.9 0 271 2 34 123 ETO32102.1 hypothetical protein RFI_05014 [Reticulomyxa filosa] diamond 540 99.4 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31822990 31822990 PRJNA760976_P_NODE_9217_length_464_cov_1.741688_g8898_i0 PRJNA760976 9217 464 1.741688 8.08143232 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 85.1 1.05e-16   NR ETO16275.1 46433 g8898 i0 41.2 2.19181034482759 114 57 73.1 2 126 464 13 117 ETO16275.1 hypothetical protein RFI_21079 [Reticulomyxa filosa] diamond 1017 85.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;