RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA760976", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA760976 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8395733 8395733 PRJNA760976_P_NODE_6067_length_546_cov_185.589852_g5752_i0 PRJNA760976 6067 546 185.589852 1013.32059192 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 71.3 1.48e-7   NTclustered gi|893150443|dbj|AB996604.1| 1561963 g5752 i0 80 9.56410256410256 110 10 20 11 440 546 766 866 Amorphochlora amoebiformis nucleomorph DNA, chromosome: 3, complete sequence, strain: CCMP2058 blastn 5222 71.3 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;