RNAquarium Metadata Server
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contig_metadata

32 rows where bioproject = "PRJNA760976", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 32 ✖

tax_clade 1

  • Amoebozoa · 32 ✖

bioproject 1

  • PRJNA760976 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2018323 2018323 PRJNA760976_P_NODE_13282_length_402_cov_5.018237_g12962_i0 PRJNA760976 13282 402 5.018237 20.17331274 Vannella ebro 207334 Discosea other_Eukaryota 531 4.06e-146   NTclustered gi|33946344|gb|AY294151.1| 207334 g12962 i0 91.26 97.5422885572139 389 34 97 0 1 389 401 13 Vannella ebro actin mRNA, complete cds blastn 39212 531 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella ebro
8395601 8395601 PRJNA760976_P_NODE_17987_length_361_cov_2.569444_g17666_i0 PRJNA760976 17987 361 2.569444 9.27569284 Platyamoeba placida 3454475 Discosea other_Eukaryota 484 2.8499999999999995e-132   NTclustered gi|33946348|gb|AY294153.1| 197527 g17666 i0 90.859 100.396121883657 361 33 100 0 1 361 872 512 Platyamoeba placida actin mRNA, partial cds blastn 36243 484 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
10946492 10946492 PRJNA760976_P_NODE_48689_length_249_cov_4.772727_g48368_i0 PRJNA760976 48689 249 4.772727 11.88409023 Platyamoeba placida 3454475 Discosea other_Eukaryota 350 7.14e-92   NTclustered gi|33946348|gb|AY294153.1| 197527 g48368 i0 91.968 99.566265060241 249 20 100 0 1 249 708 956 Platyamoeba placida actin mRNA, partial cds blastn 24792 350 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
10946503 10946503 PRJNA760976_P_NODE_5129_length_586_cov_4.879142_g4818_i0 PRJNA760976 5129 586 4.879142 28.59177212 Vannella persistens 303303 Discosea other_Eukaryota 950 0   NTclustered gi|165968548|gb|EU377588.1| 303303 g4818 i0 95.911 87.1245733788396 587 23 100 1 1 586 130 716 Vannella persistens strain CRIB69 18S ribosomal RNA gene, partial sequence blastn 51055 950 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella persistens
12221943 12221943 PRJNA760976_P_NODE_13370_length_402_cov_0.969605_g13050_i0 PRJNA760976 13370 402 0.969605 3.8978121 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 171 1.77e-50   NR XP_004337280.1 1257118 g13050 i0 65.6 0.977611940298508 131 44 97.8 1 3 395 118 247 XP_004337280.1 40S ribosomal protein S3a, putative [Acanthamoeba castellanii str. Neff] diamond 393 171 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12221969 12221969 PRJNA760976_P_NODE_19390_length_352_cov_4.878136_g19069_i0 PRJNA760976 19390 352 4.878136 17.17103872 Ripella decalvata 2047822 Discosea other_Eukaryota 562 1.2399999999999997e-155   NTclustered gi|1269228416|gb|MF683541.1| 2047822 g19069 i0 95.751 99.9659090909091 353 8 99 6 2 352 899 552 Ripella decalvata clone 26.1.53 18S ribosomal RNA gene, partial sequence blastn 35188 562 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella decalvata
12222025 12222025 PRJNA760976_P_NODE_3930_length_659_cov_1.674061_g3624_i0 PRJNA760976 3930 659 1.674061 11.03206199 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 536 1.49e-147   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g3624 i0 81.818 40.4355083459788 671 92 99 21 1 658 32298 32951 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 26647 536 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
13496128 13496128 PRJNA760976_P_NODE_3431_length_703_cov_4.644444_g3129_i0 PRJNA760976 3431 703 4.644444 32.65044132 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 228 1.0899999999999999e-54   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g3129 i0 74.179 32.7809388335704 670 118 93 40 4 656 31907 32538 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 23045 228 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
14771230 14771230 PRJNA760976_P_NODE_17672_length_364_cov_1.058419_g17351_i0 PRJNA760976 17672 364 1.058419 3.85264516 Cochliopodium spiniferum 313558 Discosea other_Eukaryota 348 3.93e-91   NTclustered gi|330902904|gb|JF298276.1| 313558 g17351 i0 84.123 100.164835164835 359 57 99 0 5 363 413 55 Cochliopodium spiniferum clone 5105 actin gene, partial cds blastn 36460 348 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium spiniferum
15233519 15233519 PRJNA760976_P_NODE_20392_length_346_cov_4.413919_g20071_i0 PRJNA760976 20392 346 4.413919 15.27215974 Vannellidae 95227 Discosea other_Eukaryota 569 7.31e-158   NTclustered gi|62865947|gb|AY929922.1| 325065 g20071 i0 96.286 100.439306358382 350 8 99 3 1 345 572 921 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 34752 569 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
16045092 16045092 PRJNA760976_P_NODE_7893_length_492_cov_1.608592_g7574_i0 PRJNA760976 7893 492 1.608592 7.91427264 Vannella sp. strain CAZ6/I 325077 Discosea other_Eukaryota 514 5.09e-141   NTclustered gi|62865939|gb|AY929914.1| 325077 g7574 i0 96.238 63.6524390243902 319 3 64 5 176 492 3 314 Vannella sp. strain CAZ6/I 18S small subunit ribosomal RNA gene, partial sequence blastn 31317 514 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain CAZ6/I
18593996 18593996 PRJNA760976_P_NODE_14915_length_387_cov_1.191083_g14594_i0 PRJNA760976 14915 387 1.191083 4.60949121 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 133 4.31e-35   NR XP_004368288.1 1257118 g14594 i0 55 2.04651162790698 131 49 97.7 4 379 2 59 184 XP_004368288.1 cysteine proteinase precursor, putative [Acanthamoeba castellanii str. Neff] diamond 792 133 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22419639 22419639 PRJNA760976_P_NODE_22538_length_334_cov_3.030651_g22217_i0 PRJNA760976 22538 334 3.030651 10.12237434 Paravannella minima 1443144 Discosea other_Eukaryota 113 1.42e-20   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g22217 i0 74.214 3.44610778443114 318 61 93 18 16 325 2782 3086 Paravannella minima mitochondrion, complete genome blastn 1151 113 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
26799899 26799899 PRJNA760976_P_NODE_49761_length_248_cov_0.880000_g49440_i0 PRJNA760976 49761 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 150 1.2699999999999999e-42   NR XP_004338972.1 1257118 g49440 i0 91.1 8.625 79 7 95.6 0 238 2 10 88 XP_004338972.1 adenine nucleotide translocator, putative [Acanthamoeba castellanii str. Neff] diamond 2139 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26809711 26809711 PRJNA760976_P_NODE_24621_length_324_cov_1.796813_g24300_i0 PRJNA760976 24621 324 1.796813 5.82167412 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 137 5.7e-36   NR XP_004333651.1 1257118 g24300 i0 68.5 3.43518518518519 92 29 85.2 0 42 317 2 93 XP_004333651.1 coronin3, putative [Acanthamoeba castellanii str. Neff] diamond 1113 138 0.992753623188406 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27179352 27179352 PRJNA760976_P_NODE_12882_length_408_cov_0.919403_g12562_i0 PRJNA760976 12882 408 0.919403 3.75116424 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.4 2.34e-10   NR XP_004354042.1 1257118 g12562 i0 36.5 1.44117647058824 104 63 74.3 2 105 407 14 117 XP_004354042.1 uncharacterized protein ACA1_165550 [Acanthamoeba castellanii str. Neff] diamond 588 67.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27306134 27306134 PRJNA760976_P_NODE_12563_length_412_cov_0.902655_g12243_i0 PRJNA760976 12563 412 0.902655 3.7189386 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 173 6.309999999999999e-52   NR XP_004339669.1 1257118 g12243 i0 66.9 1.71116504854369 118 39 85.9 0 390 37 5 122 XP_004339669.1 Rasrelated protein Rac1, putative [Acanthamoeba castellanii str. Neff] diamond 705 173 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28221539 28221539 PRJNA760976_P_NODE_49206_length_249_cov_0.869318_g48885_i0 PRJNA760976 49206 249 0.869318 2.16460182 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.9 8.28e-8   NR XP_004340035.1 1257118 g48885 i0 53.3 0.72289156626506 60 26 72.3 1 219 40 291 348 XP_004340035.1 DNA gyrase/topoisomerase IV, A subunit [Acanthamoeba castellanii str. Neff] diamond 180 58.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28253204 28253204 PRJNA760976_P_NODE_13266_length_403_cov_1.151515_g12946_i0 PRJNA760976 13266 403 1.151515 4.64060545 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 175 4.84e-50   NR XP_004333651.1 1257118 g12946 i0 57 4.95781637717122 135 56 99 1 2 400 232 366 XP_004333651.1 coronin3, putative [Acanthamoeba castellanii str. Neff] diamond 1998 175 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28253205 28253205 PRJNA760976_P_NODE_16226_length_375_cov_2.185430_g15905_i0 PRJNA760976 16226 375 2.18543 8.1953625 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 84.7 3.42e-16   NR XP_004358280.1 1257118 g15905 i0 44.3 0.976 122 48 97.6 3 8 373 584 685 XP_004358280.1 Myosin2 heavy chain, non muscle, putative [Acanthamoeba castellanii str. Neff] diamond 366 84.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28884699 28884699 PRJNA760976_P_NODE_18648_length_357_cov_1.591549_g18327_i0 PRJNA760976 18648 357 1.591549 5.68182993 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 133 1.89e-37   NR 7SOG_A 5755 g18327 i0 55.5 0.92436974789916 110 48 91.6 1 327 1 3 112 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 330 133 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29421311 29421311 PRJNA760976_P_NODE_10929_length_434_cov_2.412742_g10610_i0 PRJNA760976 10929 434 2.412742 10.47130028 Acanthamoeba polyphaga 5757 Discosea other_Eukaryota 150 1.5199999999999996e-43   NR 1CNU_A 5757 g10610 i0 53.8 9.25576036866359 130 60 89.9 0 414 25 2 131 1CNU_A Chain A, ACTOPHORIN [Acanthamoeba polyphaga] diamond 4017 150 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba polyphaga
29484401 29484401 PRJNA760976_P_NODE_11630_length_424_cov_3.282051_g11310_i0 PRJNA760976 11630 424 3.282051 13.91589624 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 146 5.06e-41   NR XP_004349741.1 1257118 g11310 i0 56 0.884433962264151 125 55 88.4 0 399 25 27 151 XP_004349741.1 uncharacterized protein ACA1_034610 [Acanthamoeba castellanii str. Neff] diamond 375 146 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30432652 30432652 PRJNA760976_P_NODE_8053_length_488_cov_3.028916_g7734_i0 PRJNA760976 8053 488 3.028916 14.78111008 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 145 1.31e-41   NR 7SOG_A 5755 g7734 i0 54.5 0.811475409836066 132 58 81.1 2 453 58 3 132 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 396 145 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30748270 30748270 PRJNA760976_P_NODE_51794_length_245_cov_1.308140_g51473_i0 PRJNA760976 51794 245 1.30814 3.204943 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 69.3 9.06e-12   NR XP_004334753.1 1257118 g51473 i0 43.8 0.783673469387755 64 36 78.4 0 234 43 209 272 XP_004334753.1 steroid isomerase [Acanthamoeba castellanii str. Neff] diamond 192 69.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30757994 30757994 PRJNA760976_P_NODE_27174_length_313_cov_1.883333_g26853_i0 PRJNA760976 27174 313 1.883333 5.89483229 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 44.3 0.0037   NR XP_004333525.1 1257118 g26853 i0 74.2 0.680511182108626 31 7 29.7 1 259 167 15 44 XP_004333525.1 Actobindin, putative [Acanthamoeba castellanii str. Neff] diamond 213 44.7 0.991051454138702 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31032874 31032874 PRJNA760976_P_NODE_51355_length_246_cov_0.867052_g51034_i0 PRJNA760976 51355 246 0.867052 2.13294792 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 56.2 1.34e-7   NR XP_004347153.1 1257118 g51034 i0 41.3 0.914634146341463 75 41 89 2 28 246 4 77 XP_004347153.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 225 56.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31570343 31570343 PRJNA760976_P_NODE_38696_length_275_cov_1.475248_g38375_i0 PRJNA760976 38696 275 1.475248 4.056932 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 77 4.06e-15   NR XP_004334896.1 1257118 g38375 i0 51.1 1.92 88 40 93.8 2 18 275 1 87 XP_004334896.1 ribosomal protein L6, putative [Acanthamoeba castellanii str. Neff] diamond 528 77 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31854701 31854701 PRJNA760976_P_NODE_25137_length_322_cov_1.353414_g24816_i0 PRJNA760976 25137 322 1.353414 4.35799308 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 106 4.94e-25   NR XP_004338419.1 1257118 g24816 i0 65.5 0.782608695652174 84 26 76.4 2 7 252 23 105 XP_004338419.1 uncharacterized protein ACA1_352500 [Acanthamoeba castellanii str. Neff] diamond 252 106 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32044654 32044654 PRJNA760976_P_NODE_9698_length_455_cov_1.209424_g9379_i0 PRJNA760976 9698 455 1.209424 5.5028792 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 107 6.97e-24   NR XP_004348480.1 1257118 g9379 i0 43.2 1.86593406593407 132 71 85.1 2 449 63 50 180 XP_004348480.1 Prokumamolisin, activation domain containing protein [Acanthamoeba castellanii str. Neff] diamond 849 107 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32107870 32107870 PRJNA760976_P_NODE_13838_length_397_cov_0.836420_g13518_i0 PRJNA760976 13838 397 0.83642 3.3205874 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 145 3.989999999999999e-41   NR XP_004337603.1 1257118 g13518 i0 69.4 2.32745591939547 108 32 81.6 1 73 396 84 190 XP_004337603.1 ribosomal protein L23, putative [Acanthamoeba castellanii str. Neff] diamond 924 145 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32897117 32897117 PRJNA760976_P_NODE_15480_length_381_cov_2.542208_g15159_i0 PRJNA760976 15480 381 2.542208 9.68581248 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 53.1 1.9e-6   NR XP_004342335.1 1257118 g15159 i0 44.9 0.385826771653543 49 27 38.6 0 220 74 19 67 XP_004342335.1 uncharacterized protein ACA1_116980 [Acanthamoeba castellanii str. Neff] diamond 147 53.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;