contig_metadata
14 rows where bioproject = "PRJNA760904" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22882678 | 22882678 | PRJNA760904_P_NODE_17318_length_247_cov_0.885057_g17261_i0 | PRJNA760904 | 17318 | 247 | 0.885057 | 2.18609079 | Desulfovibrionaceae | 194924 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|367460290|gb|CP003221.1| | 690850 | g17261 | i0 | 96.97 | 1.06072874493927 | 33 | 1 | 13 | 0 | 21 | 53 | 1940474 | 1940506 | Desulfocurvibacter africanus subsp. africanus str. Walvis Bay chromosome, complete genome | blastn | 262 | 56.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfocurvibacter | Desulfocurvibacter africanus | ||
| 27242723 | 27242723 | PRJNA760904_P_NODE_5063_length_379_cov_1.258170_g5006_i0 | PRJNA760904 | 5063 | 379 | 1.25817 | 4.7684643 | Desulfobacterales bacterium SG8_35_2 | 1703401 | Bacteria | Bacteria | 136 | 2.24e-34 | NR | KPK29044.1 | 1703401 | g5006 | i0 | 52 | 1.93139841688654 | 123 | 59 | 97.4 | 0 | 6 | 374 | 134 | 256 | KPK29044.1 MAG: protease 2 [Desulfobacterales bacterium SG8_35_2] | diamond | 732 | 136 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacterales bacterium SG8_35_2 | ||||
| 27274405 | 27274405 | PRJNA760904_P_NODE_13443_length_260_cov_1.219251_g13386_i0 | PRJNA760904 | 13443 | 260 | 1.219251 | 3.1700526 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 58.5 | 1.1e-7 | NR | MEW5771948.1 | 2202153 | g13386 | i0 | 38.2 | 0.784615384615385 | 68 | 42 | 78.5 | 0 | 5 | 208 | 258 | 325 | MEW5771948.1 ABC transporter substrate-binding protein [Thermodesulfobacteriota bacterium] | diamond | 204 | 58.5 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 28158778 | 28158778 | PRJNA760904_P_NODE_12745_length_265_cov_1.604167_g12688_i0 | PRJNA760904 | 12745 | 265 | 1.604167 | 4.25104255 | Fundidesulfovibrio putealis | 270496 | Bacteria | Bacteria | 51.2 | 1.05e-5 | NR | WP_027192164.1 | 270496 | g12688 | i0 | 42 | 0.99622641509434 | 88 | 48 | 98.5 | 3 | 3 | 263 | 2 | 87 | WP_027192164.1 response regulator [Fundidesulfovibrio putealis] | diamond | 264 | 51.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Fundidesulfovibrio | Fundidesulfovibrio putealis | ||
| 29800313 | 29800313 | PRJNA760904_P_NODE_851_length_812_cov_1.995940_g801_i0 | PRJNA760904 | 851 | 812 | 1.99594 | 16.2070328 | Desulfovibrionales bacterium | 2448050 | Bacteria | Bacteria | 47.8 | 0.00614 | NR | NLV95849.1 | 2448050 | g801 | i0 | 27.8 | 0.491379310344828 | 133 | 65 | 49.1 | 3 | 412 | 14 | 28 | 129 | NLV95849.1 Hsp20/alpha crystallin family protein [Desulfovibrionales bacterium] | diamond | 399 | 47.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionales bacterium | ||||
| 29989960 | 29989960 | PRJNA760904_P_NODE_18671_length_244_cov_1.350877_g18614_i0 | PRJNA760904 | 18671 | 244 | 1.350877 | 3.29613988 | Desulfatitalea alkaliphila | 2929485 | Bacteria | Bacteria | 68.6 | 7.07e-12 | NR | WP_263657639.1 | 2929485 | g18614 | i0 | 40.5 | 1.88114754098361 | 79 | 46 | 97.1 | 1 | 239 | 3 | 64 | 141 | WP_263657639.1 peroxiredoxin-like family protein [Desulfatitalea alkaliphila] | diamond | 459 | 68.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfosarcinaceae | Desulfatitalea | Desulfatitalea alkaliphila | ||
| 30843100 | 30843100 | PRJNA760904_P_NODE_154_length_1525_cov_3.139118_g137_i0 | PRJNA760904 | 154 | 1525 | 3.139118 | 47.8715495 | Smithella sp. | 2053614 | Bacteria | Bacteria | 123 | 2.07e-28 | NR | HNQ64885.1 | 2053614 | g137 | i0 | 37.2 | 0.338360655737705 | 172 | 102 | 32.9 | 3 | 901 | 401 | 38 | 208 | HNQ64885.1 peroxiredoxin-like family protein [Smithella sp.] | diamond | 516 | 123 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophia | Syntrophales | Smithellaceae | Smithella | Smithella sp. | ||
| 30843108 | 30843108 | PRJNA760904_P_NODE_19914_length_242_cov_0.911243_g19857_i0 | PRJNA760904 | 19914 | 242 | 0.911243 | 2.20520806 | Syntrophobacterales bacterium | 2282155 | Bacteria | Bacteria | 78.6 | 4.07e-15 | NR | MCK9376985.1 | 2282155 | g19857 | i0 | 52.9 | 1.82231404958678 | 68 | 32 | 84.3 | 0 | 238 | 35 | 141 | 208 | MCK9376985.1 2-dehydropantoate 2-reductase [Syntrophobacterales bacterium] | diamond | 441 | 78.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacterales bacterium | ||||
| 31801011 | 31801011 | PRJNA760904_P_NODE_12217_length_269_cov_1.571429_g12160_i0 | PRJNA760904 | 12217 | 269 | 1.571429 | 4.22714401 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 49.7 | 1.91e-4 | NR | WP_119332938.1 | 35554 | g12160 | i0 | 50.8 | 2.93308550185874 | 63 | 30 | 70.3 | 1 | 247 | 59 | 834 | 895 | WP_119332938.1 Ig domain-containing protein [Geobacter sulfurreducens] | diamond | 789 | 49.7 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter sulfurreducens | ||
| 32180981 | 32180981 | PRJNA760904_P_NODE_18778_length_244_cov_0.900585_g18721_i0 | PRJNA760904 | 18778 | 244 | 0.900585 | 2.1974274 | root | 1 | Root_unresolved | Root_unresolved | 102 | 4.41e-25 | NR | WP_014809560.1 | 2358 | g18721 | i0 | 62.5 | 6.88524590163934 | 80 | 30 | 98.4 | 0 | 2 | 241 | 13 | 92 | WP_014809560.1 NADPH-dependent FMN reductase [Desulfomonile tiedjei] | diamond | 1680 | 103 | 0.990291262135922 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfomonilia | Desulfomonilales | Desulfomonilaceae | Desulfomonile | Desulfomonile tiedjei | ||
| 32298115 | 32298115 | PRJNA760904_P_NODE_7679_length_320_cov_1.246964_g7622_i0 | PRJNA760904 | 7679 | 320 | 1.246964 | 3.9902848 | Thermodesulfobacteriota bacterium | 2202153 | Bacteria | Bacteria | 126 | 4.16e-34 | NR | MEW6264895.1 | 2202153 | g7622 | i0 | 58.2 | 1.846875 | 98 | 41 | 91.9 | 0 | 312 | 19 | 85 | 182 | MEW6264895.1 DJ-1 family glyoxalase III [Thermodesulfobacteriota bacterium] | diamond | 591 | 126 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteriota bacterium | ||||||
| 32487742 | 32487742 | PRJNA760904_P_NODE_11719_length_273_cov_1.420000_g11662_i0 | PRJNA760904 | 11719 | 273 | 1.42 | 3.8766 | Geobacteraceae bacterium | 2282154 | Bacteria | Bacteria | 51.2 | 5.58e-5 | NR | KAF0218738.1 | 2282154 | g11662 | i0 | 47.4 | 0.626373626373626 | 57 | 29 | 62.6 | 1 | 93 | 263 | 1 | 56 | KAF0218738.1 MAG: methyltransferase/glycosyl transferase fusion [Geobacteraceae bacterium] | diamond | 171 | 51.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacteraceae bacterium | |||
| 32613930 | 32613930 | PRJNA760904_P_NODE_7680_length_320_cov_1.246964_g7623_i0 | PRJNA760904 | 7680 | 320 | 1.246964 | 3.9902848 | Syntrophorhabdus sp. | 2699756 | Bacteria | Bacteria | 65.1 | 1.35e-9 | NR | HOD77050.1 | 2699756 | g7623 | i0 | 40.7 | 0.759375 | 81 | 47 | 75 | 1 | 254 | 15 | 132 | 212 | HOD77050.1 DUF4062 domain-containing protein [Syntrophorhabdus sp.] | diamond | 243 | 65.1 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophorhabdia | Syntrophorhabdales | Syntrophorhabdaceae | Syntrophorhabdus | Syntrophorhabdus sp. | ||
| 32708299 | 32708299 | PRJNA760904_P_NODE_14260_length_253_cov_2.550000_g14203_i0 | PRJNA760904 | 14260 | 253 | 2.55 | 6.4515 | Desulfovibrio sp. | 885 | Bacteria | Bacteria | 41.6 | 0.0142 | NR | NMC49006.1 | 885 | g14203 | i0 | 37.3 | 0.604743083003953 | 51 | 31 | 60.5 | 1 | 26 | 178 | 4 | 53 | NMC49006.1 hypothetical protein [Desulfovibrio sp.] | diamond | 153 | 41.6 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Desulfovibrio | Desulfovibrio sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;