RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA760904" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA760904 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27021517 27021517 PRJNA760904_P_NODE_822_length_824_cov_2.687084_g772_i0 PRJNA760904 822 824 2.687084 22.14157216 Minisyncoccota bacterium 2053589 Bacteria Bacteria 64.3 6.64e-9   NR MBP9842689.1 2053589 g772 i0 38.7 0.433252427184466 119 63 43.3 6 387 743 5 113 MBP9842689.1 SET domain-containing protein-lysine N-methyltransferase [Candidatus Paceibacterota bacterium] diamond 357 64.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27779803 27779803 PRJNA760904_P_NODE_924_length_789_cov_4.920391_g874_i0 PRJNA760904 924 789 4.920391 38.82188499 Minisyncoccota bacterium 2053589 Bacteria Bacteria 71.2 3.94e-10   NR HEY4522286.1 2053589 g874 i0 56.9 0.247148288973384 65 25 24 2 225 413 16 79 HEY4522286.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 195 71.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29137599 29137599 PRJNA760904_P_NODE_10649_length_282_cov_1.325359_g10592_i0 PRJNA760904 10649 282 1.325359 3.73751238 Minisyncoccota bacterium 2053589 Bacteria Bacteria 47 4.75e-4   NR MEX0596480.1 2053589 g10592 i0 34.4 0.680851063829787 64 42 68.1 0 86 277 21 84 MEX0596480.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 192 47 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29421308 29421308 PRJNA760904_P_NODE_8469_length_307_cov_2.136752_g8412_i0 PRJNA760904 8469 307 2.136752 6.55982864 Minisyncoccota bacterium 2053589 Bacteria Bacteria 72 5.09e-14   NR MCK5027232.1 2053589 g8412 i0 47.9 2.82410423452769 71 37 69.4 0 264 52 15 85 MCK5027232.1 30S ribosomal protein S17 [Candidatus Paceibacterota bacterium] diamond 867 72 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32013001 32013001 PRJNA760904_P_NODE_5378_length_370_cov_1.033670_g5321_i0 PRJNA760904 5378 370 1.03367 3.824579 Minisyncoccota bacterium 2053589 Bacteria Bacteria 77 8.78e-14   NR MBP9822080.1 2053589 g5321 i0 44.5 0.891891891891892 110 58 87.6 2 40 363 41 149 MBP9822080.1 DUF3494 domain-containing protein [Candidatus Paceibacterota bacterium] diamond 330 77 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;