contig_metadata
13 rows where bioproject = "PRJNA760904" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2018249 | 2018249 | PRJNA760904_P_NODE_18182_length_245_cov_0.895349_g18125_i0 | PRJNA760904 | 18182 | 245 | 0.895349 | 2.19360505 | Bacteria | 2 | Bacteria | Bacteria | 141 | 3.9e-41 | NR | MEJ2153491.1 | 2026742 | g18125 | i0 | 86.1 | 7.82448979591837 | 79 | 11 | 96.7 | 0 | 239 | 3 | 49 | 127 | MEJ2153491.1 M28 family peptidase [Gemmatimonadota bacterium] | diamond | 1917 | 141 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 7582935 | 7582935 | PRJNA760904_P_NODE_10006_length_287_cov_1.761682_g9949_i0 | PRJNA760904 | 10006 | 287 | 1.761682 | 5.05602734 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 151 | 7.17e-41 | NR | MDH3290253.1 | 2026742 | g9949 | i0 | 73.4 | 1.96515679442509 | 94 | 25 | 98.3 | 0 | 287 | 6 | 171 | 264 | MDH3290253.1 L-glutamate gamma-semialdehyde dehydrogenase [Gemmatimonadota bacterium] | diamond | 564 | 151 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 9670705 | 9670705 | PRJNA760904_P_NODE_5908_length_356_cov_1.088339_g5851_i0 | PRJNA760904 | 5908 | 356 | 1.088339 | 3.87448684 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 184 | 3.54e-53 | NR | MDZ7779024.1 | 2026742 | g5851 | i0 | 69.8 | 5.89044943820225 | 116 | 35 | 97.8 | 0 | 4 | 351 | 156 | 271 | MDZ7779024.1 L-glutamate gamma-semialdehyde dehydrogenase [Gemmatimonadota bacterium] | diamond | 2097 | 184 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28442854 | 28442854 | PRJNA760904_P_NODE_1266_length_683_cov_1.267213_g1212_i0 | PRJNA760904 | 1266 | 683 | 1.267213 | 8.65506479 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 127 | 7.439999999999998e-32 | NR | MEO5902543.1 | 2026741 | g1212 | i0 | 35.8 | 4.68228404099561 | 215 | 131 | 91.8 | 3 | 668 | 42 | 45 | 258 | MEO5902543.1 SDR family oxidoreductase [Gemmatimonadaceae bacterium] | diamond | 3198 | 127 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 28663815 | 28663815 | PRJNA760904_P_NODE_8247_length_311_cov_1.294118_g8190_i0 | PRJNA760904 | 8247 | 311 | 1.294118 | 4.02470698 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 70.1 | 1.79e-11 | NR | MCU0623070.1 | 2026741 | g8190 | i0 | 40 | 1.91961414790997 | 100 | 57 | 95.5 | 2 | 11 | 307 | 42 | 139 | MCU0623070.1 S8 family peptidase [Gemmatimonadaceae bacterium] | diamond | 597 | 70.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 28948149 | 28948149 | PRJNA760904_P_NODE_13008_length_263_cov_1.826316_g12951_i0 | PRJNA760904 | 13008 | 263 | 1.826316 | 4.80321108 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 55.5 | 1.23e-6 | NR | HEX2078858.1 | 2029185 | g12951 | i0 | 64.6 | 0.547528517110266 | 48 | 17 | 54.8 | 0 | 117 | 260 | 135 | 182 | HEX2078858.1 DUF2382 domain-containing protein [Longimicrobium sp.] | diamond | 144 | 55.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 29200671 | 29200671 | PRJNA760904_P_NODE_12329_length_268_cov_2.384615_g12272_i0 | PRJNA760904 | 12329 | 268 | 2.384615 | 6.3907682 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 48.1 | 3.17e-4 | NR | WP_331071924.1 | 2029185 | g12272 | i0 | 42.2 | 1.83582089552239 | 64 | 31 | 71.6 | 1 | 268 | 77 | 118 | 175 | WP_331071924.1 YsnF/AvaK domain-containing protein [Longimicrobium sp.] | diamond | 492 | 48.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 29390094 | 29390094 | PRJNA760904_P_NODE_5689_length_361_cov_2.100694_g5632_i0 | PRJNA760904 | 5689 | 361 | 2.100694 | 7.58350534 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 92.4 | 1.45e-19 | NR | HKH91170.1 | 2026741 | g5632 | i0 | 54.6 | 4.0387811634349 | 97 | 44 | 80.6 | 0 | 1 | 291 | 211 | 307 | HKH91170.1 DUF2382 domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 1458 | 92.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 29705249 | 29705249 | PRJNA760904_P_NODE_12990_length_263_cov_2.463158_g12933_i0 | PRJNA760904 | 12990 | 263 | 2.463158 | 6.47810554 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 72 | 1.01e-12 | NR | HEX2078858.1 | 2029185 | g12933 | i0 | 66 | 3.9467680608365 | 53 | 18 | 60.5 | 0 | 47 | 205 | 137 | 189 | HEX2078858.1 DUF2382 domain-containing protein [Longimicrobium sp.] | diamond | 1038 | 72 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 30116170 | 30116170 | PRJNA760904_P_NODE_1252_length_686_cov_2.314845_g1198_i0 | PRJNA760904 | 1252 | 686 | 2.314845 | 15.8798367 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 48.5 | 0.00863 | NR | HEX2078858.1 | 2029185 | g1198 | i0 | 67.6 | 0.297376093294461 | 34 | 11 | 14.9 | 0 | 103 | 2 | 137 | 170 | HEX2078858.1 DUF2382 domain-containing protein [Longimicrobium sp.] | diamond | 204 | 48.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 30242805 | 30242805 | PRJNA760904_P_NODE_5352_length_370_cov_2.414141_g5295_i0 | PRJNA760904 | 5352 | 370 | 2.414141 | 8.9323217 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 54.3 | 1.03e-5 | NR | HEX2078858.1 | 2029185 | g5295 | i0 | 64.3 | 0.340540540540541 | 42 | 15 | 34.1 | 0 | 126 | 1 | 137 | 178 | HEX2078858.1 DUF2382 domain-containing protein [Longimicrobium sp.] | diamond | 126 | 54.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 31918033 | 31918033 | PRJNA760904_P_NODE_19517_length_243_cov_0.905882_g19460_i0 | PRJNA760904 | 19517 | 243 | 0.905882 | 2.20129326 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 84.7 | 6.31e-17 | NR | MDQ3606579.1 | 2026742 | g19460 | i0 | 47.4 | 3.92592592592593 | 78 | 40 | 96.3 | 1 | 7 | 240 | 282 | 358 | MDQ3606579.1 S9 family peptidase [Gemmatimonadota bacterium] | diamond | 954 | 84.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32202837 | 32202837 | PRJNA760904_P_NODE_598_length_950_cov_1.611174_g557_i0 | PRJNA760904 | 598 | 950 | 1.611174 | 15.306153 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 76.3 | 3.09e-11 | NR | MBM3956824.1 | 2026742 | g557 | i0 | 35.3 | 0.527368421052632 | 167 | 92 | 51.8 | 5 | 148 | 639 | 83 | 236 | MBM3956824.1 tandem-95 repeat protein [Gemmatimonadota bacterium] | diamond | 501 | 76.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;