RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA760904" and tax_phylum = "Candidatus Heimdallarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Heimdallarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA760904 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2018267 2018267 PRJNA760904_P_NODE_22_length_2822_cov_4.100400_g20_i0 PRJNA760904 22 2822 4.1004 115.713288 Archaea 2157 Archaea Archaea 707 9.289999999999998e-240   NR OLS20386.1 1841597 g20 i0 45.3 1.89227498228207 889 441 93.6 10 2663 24 2 854 OLS20386.1 MAG: Copper-exporting P-type ATPase A [Candidatus Heimdallarchaeota archaeon LC_2] diamond 5340 709 0.997179125528914 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon LC_2
28884680 28884680 PRJNA760904_P_NODE_13248_length_261_cov_1.638298_g13191_i0 PRJNA760904 13248 261 1.638298 4.27595778 Candidatus Heimdallarchaeota archaeon 2026747 Archaea Archaea 61.6 8.89e-9   NR MFQ5978018.1 2026747 g13191 i0 42.7 1.88505747126437 82 43 90.8 2 24 260 203 283 MFQ5978018.1 actin, cytoplasmic 2 [Candidatus Heimdallarchaeota archaeon] diamond 492 61.6 1 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon
32054238 32054238 PRJNA760904_P_NODE_12678_length_266_cov_1.165803_g12621_i0 PRJNA760904 12678 266 1.165803 3.10103598 Archaea 2157 Archaea Archaea 135 2.69e-35   NR MBK5112428.1 2026747 g12621 i0 72.7 7.93984962406015 88 24 99.2 0 3 266 117 204 MBK5112428.1 elongation factor 1-alpha [Candidatus Heimdallarchaeota archaeon] diamond 2112 136 0.992647058823529 Archaea   Promethearchaeati Candidatus Heimdallarchaeota         Candidatus Heimdallarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;