contig_metadata
11 rows where bioproject = "PRJNA760904", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10133578 | 10133578 | PRJNA760904_P_NODE_10648_length_282_cov_1.325359_g10591_i0 | PRJNA760904 | 10648 | 282 | 1.325359 | 3.73751238 | Oligoflexia bacterium | 2599941 | Bacteria | Bacteria | 107 | 8.05e-25 | NR | MBC7691762.1 | 2599941 | g10591 | i0 | 57.7 | 1.03191489361702 | 97 | 37 | 98.9 | 2 | 281 | 3 | 354 | 450 | MBC7691762.1 response regulator [Oligoflexia bacterium] | diamond | 291 | 107 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexia bacterium | |||||
| 13496043 | 13496043 | PRJNA760904_P_NODE_651_length_913_cov_1.727381_g606_i0 | PRJNA760904 | 651 | 913 | 1.727381 | 15.77098853 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 257 | 1.4e-80 | NR | MCK6593604.1 | 2081706 | g606 | i0 | 48.7 | 1.63636363636364 | 267 | 135 | 87.7 | 2 | 803 | 3 | 9 | 273 | MCK6593604.1 fatty acid desaturase [Bacteriovoracaceae bacterium] | diamond | 1494 | 257 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 27400898 | 27400898 | PRJNA760904_P_NODE_11603_length_274_cov_1.402985_g11546_i0 | PRJNA760904 | 11603 | 274 | 1.402985 | 3.8441789 | Halobacteriovoraceae bacterium | 2026745 | Bacteria | Bacteria | 84.7 | 3.21e-17 | NR | MBT4791939.1 | 2026745 | g11546 | i0 | 47.5 | 4.25912408759124 | 80 | 42 | 87.6 | 0 | 248 | 9 | 205 | 284 | MBT4791939.1 ribose-phosphate pyrophosphokinase [Halobacteriovoraceae bacterium] | diamond | 1167 | 84.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovoraceae bacterium | |||
| 27852418 | 27852418 | PRJNA760904_P_NODE_6864_length_335_cov_1.423664_g6807_i0 | PRJNA760904 | 6864 | 335 | 1.423664 | 4.7692744 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 107 | 6.51e-27 | NR | MCB0353192.1 | 2053517 | g6807 | i0 | 58 | 4.3701492537313404 | 81 | 30 | 72.5 | 1 | 2 | 244 | 83 | 159 | MCB0353192.1 nucleoside 2-deoxyribosyltransferase domain-containing protein [Bdellovibrionales bacterium] | diamond | 1464 | 108 | 0.990740740740741 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28189895 | 28189895 | PRJNA760904_P_NODE_19366_length_243_cov_0.905882_g19309_i0 | PRJNA760904 | 19366 | 243 | 0.905882 | 2.20129326 | Oligoflexus sp. | 1971216 | Bacteria | Bacteria | 49.3 | 1.79e-4 | NR | WP_324949067.1 | 1971216 | g19309 | i0 | 41.4 | 0.716049382716049 | 58 | 34 | 71.6 | 0 | 209 | 36 | 481 | 538 | WP_324949067.1 hypothetical protein [Oligoflexus sp.] | diamond | 174 | 49.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. | ||
| 28189902 | 28189902 | PRJNA760904_P_NODE_6186_length_349_cov_1.115942_g6129_i0 | PRJNA760904 | 6186 | 349 | 1.115942 | 3.89463758 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 45.1 | 0.0159 | NR | MFT6633249.1 | 2081706 | g6129 | i0 | 39.1 | 0.593123209169054 | 69 | 39 | 56.7 | 1 | 135 | 332 | 69 | 137 | MFT6633249.1 hypothetical protein [Bacteriovoracaceae bacterium] | diamond | 207 | 45.1 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 30306370 | 30306370 | PRJNA760904_P_NODE_692_length_892_cov_2.102564_g646_i0 | PRJNA760904 | 692 | 892 | 2.102564 | 18.75487088 | unclassified Halobacteriovorax | 2639665 | Bacteria | Bacteria | 93.2 | 5.87e-17 | NR | WP_392992637.1 | 2639665 | g646 | i0 | 34.7 | 0.988789237668161 | 294 | 144 | 98.2 | 14 | 2 | 877 | 855 | 1102 | WP_392992637.1 MULTISPECIES: tandem-95 repeat protein [unclassified Halobacteriovorax] | diamond | 882 | 93.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Halobacteriovoraceae | Halobacteriovorax | |||
| 31221927 | 31221927 | PRJNA760904_P_NODE_16435_length_248_cov_0.880000_g16378_i0 | PRJNA760904 | 16435 | 248 | 0.88 | 2.1824 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 56.2 | 2.72e-7 | NR | MCB0369154.1 | 2053517 | g16378 | i0 | 74.2 | 1.25806451612903 | 31 | 8 | 37.5 | 0 | 94 | 2 | 14 | 44 | MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] | diamond | 312 | 56.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 31538646 | 31538646 | PRJNA760904_P_NODE_19136_length_243_cov_1.794118_g19079_i0 | PRJNA760904 | 19136 | 243 | 1.794118 | 4.35970674 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 64.3 | 9.59e-10 | NR | HLT22153.1 | 2081706 | g19079 | i0 | 38 | 0.975308641975309 | 79 | 48 | 97.5 | 1 | 243 | 7 | 209 | 286 | HLT22153.1 hypothetical protein [Bacteriovoracaceae bacterium] | diamond | 237 | 64.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 32307755 | 32307755 | PRJNA760904_P_NODE_2259_length_534_cov_3.930586_g2203_i0 | PRJNA760904 | 2259 | 534 | 3.930586 | 20.98932924 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 111 | 1.0400000000000002e-27 | NR | MFA4994930.1 | 2053517 | g2203 | i0 | 49.6 | 7.39325842696629 | 113 | 54 | 61.8 | 3 | 400 | 71 | 5 | 117 | MFA4994930.1 single-stranded DNA-binding protein [Bdellovibrionales bacterium] | diamond | 3948 | 112 | 0.991071428571429 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32834243 | 32834243 | PRJNA760904_P_NODE_11620_length_274_cov_1.293532_g11563_i0 | PRJNA760904 | 11620 | 274 | 1.293532 | 3.54427768 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 43.9 | 0.0191 | NR | MBX3020021.1 | 2026715 | g11563 | i0 | 29.8 | 0.91970802919708 | 84 | 52 | 87.6 | 2 | 246 | 7 | 109 | 189 | MBX3020021.1 KilA-N domain-containing protein [Pseudobdellovibrionaceae bacterium] | diamond | 252 | 43.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;