RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA760904", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA760904 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7120969 7120969 PRJNA760904_P_NODE_13286_length_261_cov_1.468085_g13229_i0 PRJNA760904 13286 261 1.468085 3.83170185 Olpidium bornovanus 278681 Fungi Fungi 153 1.81e-41   NR BAL15351.1 278681 g13229 i0 86.2 4 87 12 100 0 1 261 415 501 BAL15351.1 translation elongation factor 2, partial [Olpidium bornovanus] diamond 1044 153 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
31411981 31411981 PRJNA760904_P_NODE_6816_length_336_cov_1.171103_g6759_i0 PRJNA760904 6816 336 1.171103 3.93490608 Olpidium bornovanus 278681 Fungi Fungi 73.2 2.44e-12   NR KAG5458150.1 278681 g6759 i0 44.6 0.821428571428571 92 49 80.4 2 1 270 961 1052 KAG5458150.1 MAG: SNF2 family N-terminal domain-containing protein, partial [Olpidium bornovanus] diamond 276 73.2 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;