RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA760904", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 9 ✖

tax_clade 1

  • Metamonada · 9 ✖

bioproject 1

  • PRJNA760904 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13496013 13496013 PRJNA760904_P_NODE_19491_length_243_cov_0.905882_g19434_i0 PRJNA760904 19491 243 0.905882 2.20129326 Dientamoeba fragilis 43352 Parabasalia other_Eukaryota 139 1.63e-28   NTclustered gi|675304606|gb|KM186141.1| 43352 g19434 i0 78.319 31.0740740740741 226 41 91 8 9 230 606 827 Dientamoeba fragilis beta-tubulin 1 mRNA, partial cds blastn 7551 139 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Dientamoeba Dientamoeba fragilis
23695144 23695144 PRJNA760904_P_NODE_10959_length_279_cov_2.111650_g10902_i0 PRJNA760904 10959 279 2.11165 5.8915035 Tritrichomonadida 740972 Parabasalia other_Eukaryota 96.3 1.57e-22   NR KAH0785682.1 135588 g10902 i0 50.5 9.47311827956989 91 44 97.8 1 274 2 48 137 KAH0785682.1 Ras-related protein RABD1 [Histomonas meleagridis] diamond 2643 96.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
24968895 24968895 PRJNA760904_P_NODE_9320_length_294_cov_1.393665_g9263_i0 PRJNA760904 9320 294 1.393665 4.0973751 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 150 9.399999999999999e-32   NTclustered gi|2806441481|ref|XM_068497464.1| 1144522 g9263 i0 77.647 24.734693877551 255 51 86 5 38 289 151 402 Tritrichomonas foetus Histone H2A (TRFO_13820), partial mRNA blastn 7272 150 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
26895119 26895119 PRJNA760904_P_NODE_6501_length_342_cov_1.531599_g6444_i0 PRJNA760904 6501 342 1.531599 5.23806858 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 55.1 2.09e-6   NR XP_001303491.1 412133 g6444 i0 49.2 1.32456140350877 61 28 50.9 1 340 167 120 180 XP_001303491.1 GTPase protein [Trichomonas vaginalis G3] diamond 453 55.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
27116125 27116125 PRJNA760904_P_NODE_8942_length_300_cov_1.211454_g8885_i0 PRJNA760904 8942 300 1.211454 3.634362 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 49.7 2.5e-4   NR XP_068352463.1 1144522 g8885 i0 36.5 1.46 74 45 72 1 239 24 340 413 XP_068352463.1 putative serine incorporator-like protein [Tritrichomonas foetus] diamond 438 49.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
28505874 28505874 PRJNA760904_P_NODE_6907_length_334_cov_1.685824_g6850_i0 PRJNA760904 6907 334 1.685824 5.63065216 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 134 1.07e-33   NR XP_068361849.1 1144522 g6850 i0 59.1 7.94910179640719 110 45 98.8 0 332 3 134 243 XP_068361849.1 phospholipid-translocating P-type ATPase, flippase family protein [Tritrichomonas foetus] diamond 2655 134 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
30726245 30726245 PRJNA760904_P_NODE_11814_length_272_cov_1.547739_g11757_i0 PRJNA760904 11814 272 1.547739 4.20985008 Tritrichomonadida 740972 Parabasalia other_Eukaryota 55.5 1.62e-6   NR XP_067778432.1 135588 g11757 i0 38.9 4.04779411764706 90 53 97.1 1 267 4 20 109 XP_067778432.1 cell division cycle protein [Histomonas meleagridis] diamond 1101 55.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31601878 31601878 PRJNA760904_P_NODE_376_length_1145_cov_3.266791_g347_i0 PRJNA760904 376 1145 3.266791 37.40475695 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 152 2.29e-36   NR XP_068366763.1 1144522 g347 i0 34 4.03755458515284 259 158 66.6 6 775 14 243 493 XP_068366763.1 TKL family protein kinase [Tritrichomonas foetus] diamond 4623 152 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32339283 32339283 PRJNA760904_P_NODE_4259_length_407_cov_0.802395_g4202_i0 PRJNA760904 4259 407 0.802395 3.26574765 Tritrichomonadida 740972 Parabasalia other_Eukaryota 59.7 8.7e-9   NR XP_067769151.1 135588 g4202 i0 54 1.12039312039312 50 23 36.9 0 2 151 34 83 XP_067769151.1 40S ribosomal protein S21 [Histomonas meleagridis] diamond 456 60.1 0.993344425956739 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;