RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA760904", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA760904 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30337931 30337931 PRJNA760904_P_NODE_112_length_1662_cov_4.538704_g100_i0 PRJNA760904 112 1662 4.538704 75.43326048 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 51.6 0.00995   NR GKT27418.1 2918883 g100 i0 35.8 0.386281588447653 81 51 14.4 1 973 734 26 106 GKT27418.1 hypothetical protein ADUPG1_000034 [Aduncisulcus paluster] diamond 642 51.6 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
32875422 32875422 PRJNA760904_P_NODE_7440_length_324_cov_1.689243_g7383_i0 PRJNA760904 7440 324 1.689243 5.47314732 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 71.6 8.79e-13   NR KAG9393833.1 201153 g7383 i0 50.6 10.7037037037037 77 35 68.5 1 79 300 112 188 KAG9393833.1 Small GTPase superfamily [Carpediemonas membranifera] diamond 3468 72 0.994444444444444 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;